RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PDPK2PQ6A1A2 396 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KIAA0907Q7Z7F0 614 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR2A12Q8NGT7 310 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RIPOR3Q96MK2 946 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BTBD10Q9BSF8 475 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KCNK4Q9NYG8 393 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 COPG2Q9UBF2 871 aa12.67□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MROH6A6NGR9 719 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FZD6O60353 706 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SNNO75324 88 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 C2P06681 752 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CPA3P15088 417 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 USP10Q14694 798 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AP1ARQ63HQ0 302 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GLT6D1Q7Z4J2 308 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WDR75Q8IWA0 830 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR4K2Q8NGD2 314 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FRS2Q8WU20 508 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NAT14Q8WUY8 206 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ACOX2Q99424 681 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SAR1AQ9NR31 198 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ELOVL2Q9NXB9 296 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MARCH4Q9P2E8 410 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MYLKQ15746 1914 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 B2RBV5 119 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 IGSF6O95976 241 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 IL1BP01584 269 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AHSGP02765 367 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FESP07332 822 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RALBP11234 206 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CD1EP15812 388 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OPRD1P41143 372 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GLRBP48167 497 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 METAP1P53582 386 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RCN1Q15293 331 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 IER5LQ5T953 404 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARMC12Q5T9G4 340 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SDR16C5Q8N3Y7 309 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RAB3IL1Q8TBN0 382 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BRSK1Q8TDC3 778 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MCUR1Q96AQ8 359 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SCYL1Q96KG9 808 aa12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 UNKQ9C0B0 810 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PRR5-ARHGAP8B1AHC4 643 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AHCYL1O43865 530 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CCDC22O60826 627 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SORBS2O94875 1100 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PGLSO95336 258 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ATP6V1C1P21283 382 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CDKN1CP49918 316 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SNRPD1P62314 119 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARHGAP8P85298 464 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 THOC5Q13769 683 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AAK1Q2M2I8 961 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CARD16Q5EG05 197 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TSPAN33Q86UF1 283 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EGFL6Q8IUX8 553 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PPP1R36Q96LQ0 422 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TSNARE1Q96NA8 513 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TRMT61BQ9BVS5 477 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ADGRE3Q9BY15 652 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC2A11Q9BYW1 496 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.65□□□□□ -0.388e-10■■■□□ 15.9
CDK5RAP3-217ENST00000580287 LMCD1Q9NZU5 365 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MAP3K13O43283 966 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SERPINE1P05121 402 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CTSLP07711 333 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WASP42768 502 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC1A2P43004 574 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CSE1LP55060 971 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AP1S1P61966 158 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MLLT1Q03111 559 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZNF460Q14592 562 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 INSCQ1MX18 579 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CMPK2Q5EBM0 449 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NEPROQ6NW34 567 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LYSMD3Q7Z3D4 306 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ENDOVQ8N8Q3 282 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RBM15BQ8NDT2 890 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NRG4Q8WWG1 115 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PNPOQ9NVS9 261 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HCN2Q9UL51 889 aa12.65□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CCDC162PA2VCL2 907 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms