RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	OR1A2	Q9Y585	309 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	OR51B4	Q9Y5P0	310 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CCDC88C	Q9P219	2028 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	TULP2	O00295	520 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	TGFB1I1	O43294	461 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	SNAP91	O60641	907 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	IPO13	O94829	963 aa	Known RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	HLA-DRA	P01903	254 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	RHOC	P08134	193 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	PLEK	P08567	350 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	SLC2A3	P11169	496 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	XPA	P23025	273 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ERCC5	P28715	1186 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	CDH4	P55283	916 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	PDE1B	Q01064	536 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	SLC20A2	Q08357	652 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	MTA1	Q13330	715 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	MTM1	Q13496	603 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	IL11RA	Q14626	422 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	KYNU	Q16719	465 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	GOLGA7B	Q2TAP0	167 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	WSCD2	Q2TBF2	565 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	CRB2	Q5IJ48	1285 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	VWA5B1	Q5TIE3	1220 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	RETSAT	Q6NUM9	610 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158		Q71RC1	249 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	PRIMA1	Q86XR5	153 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	FAM186B	Q8IYM0	893 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNF507	Q8TCN5	953 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	DQX1	Q8TE96	717 aa	Known RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	FAR1	Q8WVX9	515 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	OR1E3	Q8WZA6	343 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	NCSTN	Q92542	709 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	RNF31	Q96EP0	1072 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	SGSM3	Q96HU1	749 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	AGAP3	Q96P47	875 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	LLPH	Q9BRT6	129 aa	Known RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	WRAP53	Q9BUR4	548 aa	Known RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	TRIM62	Q9BVG3	475 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	CEP44	Q9C0F1	390 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	NIF3L1	Q9GZT8	377 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	TAAR2	Q9P1P5	351 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	HECA	Q9UBI9	543 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	KLHL3	Q9UH77	587 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNHIT2	Q9UHR6	403 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	VPS51	Q9UID3	782 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	NTNG1	Q9Y2I2	539 aa		5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	NCOA6	Q14686	2063 aa	Predicted RBP	5.97	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.96	□□□□□ -1.45
KPNB1-209	ENST00000580158	TMEM202	A6NGA9	273 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	CCL21	O00585	134 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	AREL1	O15033	823 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	THAP12	O43422	761 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FBXO21	O94952	628 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	BMP15	O95972	392 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	PCCB	P05166	539 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	SETSIP	P0DME0	302 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	GJB2	P29033	226 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	IST1	P53990	364 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	RAD23B	P54727	409 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	KIAA1024L	P59773	190 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	RPS18	P62269	152 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	ELP6	Q0PNE2	266 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FOXD4	Q12950	439 aa	Predicted RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	RAPSN	Q13702	412 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	NFKBIB	Q15653	356 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FCRL6	Q6DN72	434 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FBXL22	Q6P050	247 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	IGFL3	Q6UXB1	125 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	PLXDC1	Q8IUK5	500 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	NAGS	Q8N159	534 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	ARFGAP1	Q8N6T3	406 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	DCAF4L2	Q8NA75	395 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	SLC4A11	Q8NBS3	891 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	OR52K2	Q8NGK3	314 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	UBA3	Q8TBC4	463 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	PATE1	Q8WXA2	126 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	UBXN4	Q92575	508 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FAM149B1	Q96BN6	582 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	MTFMT	Q96DP5	389 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	CCDC120	Q96HB5	630 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	ELMO2	Q96JJ3	720 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	KLHL32	Q96NJ5	620 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	TRAPPC9	Q96Q05	1148 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	OR6C1	Q96RD1	312 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	PSMB7	Q99436	277 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	PRMT1	Q99873	361 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	BRD8	Q9H0E9	1235 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	CXXC4	Q9H2H0	198 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	STN1	Q9H668	368 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	CARS2	Q9HA77	564 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FGF22	Q9HCT0	170 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	VANGL2	Q9ULK5	521 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	FARSA	Q9Y285	508 aa	Known RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	TBC1D30	Q9Y2I9	924 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	COQ6	Q9Y2Z9	468 aa		5.96	□□□□□ -1.46
KPNB1-209	ENST00000580158	TRGV8	A0A0C4DH27	118 aa		5.95	□□□□□ -1.46

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