RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NAT6Q93015 286 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 PDXPQ96GD0 296 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 HES6Q96HZ4 224 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TBATAQ96M53 351 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 FCRL5Q96RD9 977 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 LYSMD1Q96S90 227 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ZSCAN5AQ9BUG6 496 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 FICDQ9BVA6 458 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 GSDMCQ9BYG8 508 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 GBA3Q9H227 469 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TRABDQ9H4I3 376 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 BPIFA1Q9NP55 256 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TOR4AQ9NXH8 423 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 HACD3Q9P035 362 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 SUFUQ9UMX1 484 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 PPP2R2CQ9Y2T4 447 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF711Q9Y462 761 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 CAPN6Q9Y6Q1 641 aa6.52□□□□□ -1.37
TRAF4-213ENST00000578917 DSPP15924 2871 aaKnown RBP6.52□□□□□ -1.37
TRAF4-213ENST00000578917 TRPM6Q9BX84 2022 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TRBV23OR9-2A0A075B6M9 112 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 LOC285095A0A1B0GVY8 99 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TRABD2BA6NFA1 517 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 RHPN2P1A8MT19 583 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 B4DGG1 531 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 STX7O15400 261 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 DDX3YO15523 660 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 BUD23O43709 281 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CEP104O60308 925 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SNX2O60749 519 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CRTAMO95727 393 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 GAS8O95995 478 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 MT-CO3P00414 261 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 IFNB1P01574 187 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 FGF1P05230 155 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 GP1BAP07359 652 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CELA2BP08218 269 aaPredicted RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 HLA-DPA1P20036 260 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 MSNP26038 577 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PSMB4P28070 264 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TEAD1P28347 426 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ALDH4A1P30038 563 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 STIP1P31948 543 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ADCY8P40145 1251 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ACTR1BP42025 376 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CHRNA4P43681 627 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CLDN6P56747 220 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ACTR1AP61163 376 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PDE1BQ01064 536 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CTBSQ01459 385 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SLC1A5Q15758 541 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SLC14A2Q15849 920 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ST3GAL2Q16842 350 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 LONRF2Q1L5Z9 754 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PARP6Q2NL67 630 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ZNF569Q5MCW4 686 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 MEI1Q5TIA1 1274 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ZDHHC20Q5W0Z9 365 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 GUSBP11Q6P575 273 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 KDELC1Q6UW63 502 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 NYAP1Q6ZVC0 841 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 GLT6D1Q7Z4J2 308 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TMC3Q7Z5M5 1100 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SLC35F3Q8IY50 421 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 RAVER1Q8IY67 606 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CCDC89Q8N998 374 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 OR6C4Q8NGE1 309 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ZDHHC1Q8WTX9 485 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 MAIP1Q8WWC4 291 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 C1orf54Q8WWF1 131 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ATG4AQ8WYN0 398 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 OXNAD1Q96HP4 312 aaPredicted RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SPATA13Q96N96 652 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 DEPDC7Q96QD5 511 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 OR2M4Q96R27 311 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TRIB3Q96RU7 358 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 APOL2Q9BQE5 337 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 HERPUD2Q9BSE4 406 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TMEM121Q9BTD3 319 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 BOCQ9BWV1 1114 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ZMYND15Q9H091 742 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 OR2AG1Q9H205 316 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CCDC86Q9H6F5 360 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 ARFGAP3Q9NP61 516 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 TRNAU1APQ9NX07 287 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 LRIT1Q9P2V4 623 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PNMA8BQ9ULN7 279 aaPredicted RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 WASF3Q9UPY6 502 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 SLC17A4Q9Y2C5 497 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 R3HDM2Q9Y2K5 976 aaKnown RBP6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PRKAB1Q9Y478 270 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
TRAF4-213ENST00000578917 CEP192Q8TEP8 1941 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 ADAMTS9Q9P2N4 1935 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 GLYATL1P3A0A0U1RQE8 302 aa6.5□□□□□ -1.37
TRAF4-213ENST00000578917 TCRBV7S2A1N4TA0A589 114 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms