RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 MYF5P13349 255 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 DGKAP23743 735 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ARRB1P49407 418 aaPredicted RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 MRPS25P82663 173 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 GPS1Q13098 491 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 CCDC38Q502W7 563 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ANKRD22Q5VYY1 191 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 FAM151BQ6UXP7 276 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ADAMTSL4Q6UY14 1074 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 MARK2Q7KZI7 788 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 DCP2Q8IU60 420 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 OXR1Q8N573 874 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ZNF548Q8NEK5 533 aaPredicted RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ATL2Q8NHH9 583 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 RTKNQ9BST9 563 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 FRMD8Q9BZ67 464 aaPredicted RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 ARNT2Q9HBZ2 717 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 PHPT1Q9NRX4 125 aaPredicted RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 HOMER3Q9NSC5 361 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 APOBEC3BQ9UH17 382 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 FKBPLQ9UIM3 349 aa21.58■■□□□ 1.05
CDC42EP4-203ENST00000578516 GOLGA6L10A0A0M3HER8 536 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 SPAARA0A1B0GVQ0 90 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 PCDHGA12O60330 932 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 GIMD1P0DJR0 217 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 HMGCLP35914 325 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 ZNF140P52738 457 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 SRP54P61011 504 aaKnown RBP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 PTK2BQ14289 1009 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 KHDC1Q4VXA5 237 aaKnown RBP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 CERCAMQ5T4B2 595 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 PSAPL1Q6NUJ1 521 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 PPP1R21Q6ZMI0 780 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 EID2Q8N6I1 236 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 OR4K2Q8NGD2 314 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 OR56A4Q8NGH8 313 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 LMX1AQ8TE12 382 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 DNAJC1Q96KC8 554 aaKnown RBP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 PPP1R2P1Q96PQ5 205 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 CLPBQ9H078 707 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 CYP4F12Q9HCS2 524 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 HACD3Q9P035 362 aa21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 COL5A1P20908 1838 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP4-203ENST00000578516 TRIM38O00635 465 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 LDB2O43679 373 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 MTX2O75431 263 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 TMEM63AO94886 807 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 SUN1O94901 812 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 RASGRP1O95267 797 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 CEACAM5P06731 702 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PTGIRP43119 386 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 NOVA1P51513 510 aaKnown RBP21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 DCDC1P59894 354 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PPARDQ03181 441 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 TAF1AQ15573 450 aaPredicted RBP21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 CHRNA6Q15825 494 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PRRT3Q5FWE3 981 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 ZNF534Q76KX8 674 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 CCL4L1Q8NHW4 92 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 NAT14Q8WUY8 206 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 COX14Q96I36 57 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 TRABDQ9H4I3 376 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 IL26Q9NPH9 171 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 CASS4Q9NQ75 786 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PCOLCE2Q9UKZ9 415 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PRKAB1Q9Y478 270 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PLEKHM1Q9Y4G2 1056 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PCDHGB2Q9Y5G2 931 aa21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 GOLGA4Q13439 2230 aaKnown RBP21.56■■□□□ 1.04
CDC42EP4-203ENST00000578516 PRSS38A1L453 326 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 STX7O15400 261 aaKnown RBP21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 PSMD3O43242 534 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A9O60656 530 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 CBFA2T3O75081 653 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 PRSS56P0CW18 603 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A6P19224 532 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A1P22309 533 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A4P22310 534 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 HTR1BP28222 390 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 TEAD1P28347 426 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A3P35503 534 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A5P35504 534 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 SPAM1P38567 509 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 FNTAP49354 379 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 CRADDP78560 199 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 C2orf54Q08AI8 447 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 KCNJ11Q14654 390 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 DEFB133Q30KQ1 61 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 ATP13A5Q4VNC0 1218 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 DBX2Q6ZNG2 339 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 SFTPA2Q8IWL1 248 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 DNAAF3Q8N9W5 541 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 RHBDD1Q8TEB9 315 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 TRIM44Q96DX7 344 aaPredicted RBP21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 CCDC97Q96F63 343 aaPredicted RBP21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 HIC2Q96JB3 615 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 TRIM51Q9BSJ1 452 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A7Q9HAW7 530 aa21.55■■□□□ 1.04
CDC42EP4-203ENST00000578516 UGT1A10Q9HAW8 530 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms