RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TCAF1Q9Y4C2 921 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FAM169AQ9Y6X4 670 aa11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 V9GYY5 206 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ANKRD17O75179 2603 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 AURKAO14965 403 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LATO43561 262 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPAG6O75602 509 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CLDN7O95471 211 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CTPS1P17812 591 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GM2AP17900 193 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PGAM1P18669 254 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HADHAP40939 763 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ELK3P41970 407 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MAGEA4P43358 317 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ARCN1P48444 511 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPINT3P49223 89 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZNF140P52738 457 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ADPRHP54922 357 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SESN2P58004 480 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DCDC1P59894 354 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DPTQ07507 201 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PDIA2Q13087 525 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 POU6F1Q14863 301 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ELF2Q15723 593 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CNGA3Q16281 694 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ANKRD20A4Q4UJ75 823 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TMEM259Q4ZIN3 620 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LRRC66Q68CR7 880 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KIAA1161Q6NSJ0 714 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZNF765Q7L2R6 523 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TRIM69Q86WT6 500 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IGDCC3Q8IVU1 814 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MPP5Q8N3R9 675 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MREGQ8N565 214 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CADM4Q8NFZ8 388 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OR13J1Q8NGT2 312 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OR2T34Q8NGX1 318 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LENG8Q96PV6 779 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLEKHG4BQ96PX9 1271 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C1QTNF2Q9BXJ5 285 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 BTBD1Q9H0C5 482 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SLC6A17Q9H1V8 727 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RAD18Q9NS91 495 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SYBUQ9NX95 663 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 COL6A6A6NMZ7 2263 aa11.11□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLXND1Q9Y4D7 1925 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IGHV1OR15-9A0A0B4J2B8 117 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C1orf232A0A0U1RR37 186 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MAP3K13O43283 966 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 POLBP06746 335 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 XPAP23025 273 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TEAD1P28347 426 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CD6P30203 668 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NUDT1P36639 197 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LIG3P49916 1009 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CCR5P51681 352 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RPS21P63220 83 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FAM193AP78312 1265 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 XIAPP98170 497 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ARHGEF7Q14155 803 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PTPRRQ15256 657 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 BBS9Q3SYG4 887 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SPANXN3Q5MJ09 141 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ANO7Q6IWH7 933 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LYSMD3Q7Z3D4 306 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TSPAN33Q86UF1 283 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LMNTD2Q8IXW0 634 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FBXO36Q8NEA4 188 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PPHLN1Q8NEY8 458 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 BLOC1S5Q8TDH9 187 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ADAMTS14Q8WXS8 1223 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CDKN2AIPNLQ96HQ2 116 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZNF778Q96MU6 729 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TTC25Q96NG3 672 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SMIM14Q96QK8 99 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HHIPQ96QV1 700 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PIH1D1Q9NWS0 290 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZFR2Q9UPR6 939 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ARL5AQ9Y689 179 aa11.1□□□□□ -0.63
CDK5RAP3-204ENST00000577664 LRRC72A6NJI9 287 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PLK4O00444 970 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C1QAP02745 245 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PRKCGP05129 697 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C1SP09871 688 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PIRTP0C851 137 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 BPIP17213 487 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms