RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 HEMGNQ9BXL5 484 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 IFIH1Q9BYX4 1025 aaKnown RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 NUF2Q9BZD4 464 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 LRRC4Q9HBW1 653 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ASAH2Q9NR71 780 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 DDX43Q9NXZ2 648 aaKnown RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 PADI1Q9ULC6 663 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 TTC7AQ9ULT0 858 aaPredicted RBP2.38□□□□□ -2.03
TOP2A-202ENST00000577541 ERVK-11Q9UQG0 969 aa2.38□□□□□ -2.03
TOP2A-202ENST00000577541 TEX13CA0A0J9YWL9 993 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 TNPO2O14787 897 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 WDR1O75083 606 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 F9P00740 461 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ATP1A1P05023 1023 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 FGF5P12034 268 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 MYOD1P15172 320 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF23P17027 643 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ITGA2P17301 1181 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 BDKRB2P30411 391 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 HOXC9P31274 260 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ABCD1P33897 745 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 DDIT3P35638 169 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 CPOXP36551 454 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 NR0B1P51843 470 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 IRX6P78412 446 aaPredicted RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 NAE1Q13564 534 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PPP2R5BQ15173 497 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 GPR68Q15743 365 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ALG11Q2TAA5 492 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 SLC9B1Q4ZJI4 515 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ARHGAP17Q68EM7 881 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 RGMBQ6NW40 437 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 SLC22A25Q6T423 547 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF704Q6ZNC4 412 aaPredicted RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 CACNA2D4Q7Z3S7 1137 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PCDH20Q8N6Y1 951 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 NFKBIDQ8NI38 313 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 FAM76AQ8TAV0 307 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 DUSP19Q8WTR2 217 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 HTRA1Q92743 480 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PIGTQ969N2 578 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 TRIM63Q969Q1 353 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 KLHL29Q96CT2 875 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF501Q96CX3 271 aaPredicted RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 KLHL15Q96M94 604 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 MOV10L1Q9BXT6 1211 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 BARHL1Q9BZE3 327 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 GGA3Q9NZ52 723 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 ABI3Q9P2A4 366 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PDP2Q9P2J9 529 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 CTNNAL1Q9UBT7 734 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PGAP2Q9UHJ9 254 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 RALYQ9UKM9 306 aaKnown RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 SARDHQ9UL12 918 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 KCNS2Q9ULS6 477 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 COL4A4P53420 1690 aaPredicted RBP2.37□□□□□ -2.03
TOP2A-202ENST00000577541 PTPRCP08575 1304 aa2.37□□□□□ -2.03
TOP2A-202ENST00000577541 TTC36A6NLP5 189 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 IFNL4K9M1U5 179 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 CAPN9O14815 690 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 IGHV4-39P01824 125 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 HNRNPA1P09651 372 aaKnown RBP eCLIP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 DCTP40126 519 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 IL15P40933 162 aaPredicted RBP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 UBA7P41226 1012 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 RPP30P78346 268 aaKnown RBP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 RUNX1T1Q06455 604 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 GALNT2Q10471 571 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 PPIGQ13427 754 aaKnown RBP eCLIP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 OLIG2Q13516 323 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 FGFBP1Q14512 234 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 TAF12Q16514 161 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 GSTA3Q16772 222 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 TMEM30BQ3MIR4 351 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 SLC45A4Q5BKX6 768 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 HIST2H2BDQ6DRA6 164 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 LCN10Q6JVE6 187 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 ZNF280DQ6N043 979 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 DPPA4Q7L190 304 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 SLC9B2Q86UD5 537 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 TDRPQ86YL5 185 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 BEST3Q8N1M1 668 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 SLC24A4Q8NFF2 622 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 OR13A1Q8NGR1 328 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 BBS10Q8TAM1 723 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 RHBDF1Q96CC6 855 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 LGALS12Q96DT0 336 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 PABPC5Q96DU9 382 aaKnown RBP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 QRFPRQ96P65 431 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 NEURL2Q9BR09 285 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 STRA6Q9BX79 667 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 MAGIXQ9H6Y5 334 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 GPR108Q9NPR9 543 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 WASH6PQ9NQA3 447 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 C2orf42Q9NWW7 574 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 SAGE1Q9NXZ1 904 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 LUZP4Q9P127 313 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 UBA2Q9UBT2 640 aaPredicted RBP2.36□□□□□ -2.03
TOP2A-202ENST00000577541 SLC13A4Q9UKG4 626 aa2.36□□□□□ -2.03
TOP2A-202ENST00000577541 PADI3Q9ULW8 664 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms