RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 PATE1Q8WXA2 126 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 SPOCK2Q92563 424 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 SYN2Q92777 582 aaPredicted RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 SCAMP4Q969E2 229 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 CCDC74BQ96LY2 380 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 SMIM14Q96QK8 99 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 OR2M4Q96R27 311 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 DPYSL5Q9BPU6 564 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 NUDT22Q9BRQ3 303 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 RIOK2Q9BVS4 552 aaKnown RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 MAK16Q9BXY0 300 aaKnown RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 B3GNT4Q9C0J1 378 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 STN1Q9H668 368 aaKnown RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 FOXJ2Q9P0K8 574 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 CTTNBP2NLQ9P2B4 639 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 RCOR3Q9P2K3 495 aaPredicted RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 DNPEPQ9ULA0 475 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 SLC17A4Q9Y2C5 497 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 LUC7L2Q9Y383 392 aaKnown RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 PPIL1Q9Y3C6 166 aa6.53□□□□□ -1.36
POLR2A-204ENST00000575547 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
POLR2A-204ENST00000575547 IGHV1OR21-1A0A087WYE8 117 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 A0A087X0T9 212 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 C1orf232A0A0U1RR37 186 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 EFCAB7A8K855 629 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 GOLGA6L19H0YKK7 550 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 FZD6O60353 706 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SNX2O60749 519 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 MAP3K6O95382 1288 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 JCHAINP01591 159 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 KRT7P08729 469 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 FAM87AP0C7U9 286 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 FAM228BP0C875 321 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 MAPK9P45984 424 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 STC1P52823 247 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 CYP4F2P78329 520 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 GPLD1P80108 840 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 DSC2Q02487 901 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SLC25A11Q02978 314 aaKnown RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 NFATC2Q13469 925 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SQSTM1Q13501 440 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 DPYSL3Q14195 570 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 NR1D2Q14995 579 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 IQCB1Q15051 598 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PAFAH1B3Q15102 231 aaKnown RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PDK2Q15119 407 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 TBR1Q16650 682 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PYCR3Q53H96 274 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ODF2Q5BJF6 829 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 DCAF12Q5T6F0 453 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 CCDC70Q6NSX1 233 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ZNF765Q7L2R6 523 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 CHST15Q7LFX5 561 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SLC9B2Q86UD5 537 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ZNF761Q86XN6 746 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 DTX1Q86Y01 620 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 NIPA2Q8N8Q9 360 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 LPCAT1Q8NF37 534 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 OR4D9Q8NGE8 314 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ZNF564Q8TBZ8 553 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 NCSTNQ92542 709 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ART4Q93070 314 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SH3KBP1Q96B97 665 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 SCARF2Q96GP6 870 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ZNF830Q96NB3 372 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 MCCC1Q96RQ3 725 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 MLPHQ9BV36 600 aaPredicted RBP6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ADGRE3Q9BY15 652 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 ASPSCR1Q9BZE9 553 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 FAM83DQ9H4H8 585 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 CLMPQ9H6B4 373 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PCDH9Q9HC56 1237 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PKD2L2Q9NZM6 624 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 AMACRQ9UHK6 382 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 CAPN11Q9UMQ6 739 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PRKAB1Q9Y478 270 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 PCDHGA4Q9Y5G9 962 aa6.52□□□□□ -1.37
POLR2A-204ENST00000575547 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
POLR2A-204ENST00000575547 KALRNO60229 2985 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 COL6A6A6NMZ7 2263 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 AHCTF1Q8WYP5 2266 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 RGSL1A5PLK6 1076 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 B4E171 279 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 ANKRD66B4E2M5 251 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 GRID2O43424 1007 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 DUX1O43812 170 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 MFSD11O43934 449 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 PROSCO94903 275 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 WISP1O95388 367 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 SOD1P00441 154 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 ATP1A1P05023 1023 aaKnown RBP6.51□□□□□ -1.37
POLR2A-204ENST00000575547 TPM3P06753 285 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 H2AFZP0C0S5 128 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 ACP5P13686 325 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 SLC2A4P14672 509 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 MAN1A1P33908 653 aa6.51□□□□□ -1.37
POLR2A-204ENST00000575547 TSPAN7P41732 249 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms