RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CCDC78A2IDD5 438 aa17■□□□□ 0.31
NUP88-210ENST00000574867 MAGEC1O60732 1142 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PRAMEF1O95521 474 aa17■□□□□ 0.31
NUP88-210ENST00000574867 TTC4O95801 387 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PAMP19021 973 aa17■□□□□ 0.31
NUP88-210ENST00000574867 TRIM23P36406 574 aa17■□□□□ 0.31
NUP88-210ENST00000574867 CLDN2P57739 230 aa17■□□□□ 0.31
NUP88-210ENST00000574867 YPEL5P62699 121 aa17■□□□□ 0.31
NUP88-210ENST00000574867 TMPRSS15P98073 1019 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PDIA2Q13087 525 aaKnown RBP17■□□□□ 0.31
NUP88-210ENST00000574867 INPP5AQ14642 412 aa17■□□□□ 0.31
NUP88-210ENST00000574867 FAM151BQ6UXP7 276 aa17■□□□□ 0.31
NUP88-210ENST00000574867 TMEM135Q86UB9 458 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PLA2G15Q8NCC3 412 aa17■□□□□ 0.31
NUP88-210ENST00000574867 UBXN4Q92575 508 aa17■□□□□ 0.31
NUP88-210ENST00000574867 CDKN2AIPNLQ96HQ2 116 aa17■□□□□ 0.31
NUP88-210ENST00000574867 BMFQ96LC9 184 aa17■□□□□ 0.31
NUP88-210ENST00000574867 ZNF778Q96MU6 729 aa17■□□□□ 0.31
NUP88-210ENST00000574867 PWWP2AQ96N64 755 aa17■□□□□ 0.31
NUP88-210ENST00000574867 FAM86C1Q9NVL1 165 aa17■□□□□ 0.31
NUP88-210ENST00000574867 SLCO1B1Q9Y6L6 691 aa17■□□□□ 0.31
NUP88-210ENST00000574867 POM121BA6NF01 834 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 USP1O94782 785 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 SOD1P00441 154 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 POLBP06746 335 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 PFN3P60673 137 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 PRAMEP78395 509 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 PTAR1Q7Z6K3 402 aaPredicted RBP16.99■□□□□ 0.31
NUP88-210ENST00000574867 EIF1ADQ8N9N8 165 aaKnown RBP16.99■□□□□ 0.31
NUP88-210ENST00000574867 FMO2Q99518 471 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 TMEM74BQ9NUR3 256 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 SMOXQ9NWM0 555 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 SLC2A6Q9UGQ3 507 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 GMEB2Q9UKD1 530 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 CA5BQ9Y2D0 317 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 TEX264Q9Y6I9 313 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 RPS6KL1Q9Y6S9 549 aa16.99■□□□□ 0.31
NUP88-210ENST00000574867 A0A1W2PR77 199 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 H0Y8X5 98 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 K7ESM1 405 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 GAPDHSO14556 408 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 RETP07949 1114 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 HOXC4P09017 264 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 ITGALP20701 1170 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 NMBRP28336 390 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 MPLP40238 635 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 ELK3P41970 407 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 CARSP49589 748 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 XIAPP98170 497 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 KIAA0930Q6ICG6 404 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 AFTPHQ6ULP2 937 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 HEATR4Q86WZ0 1026 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 DCP2Q8IU60 420 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 ZNF669Q96BR6 464 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 MFSD3Q96ES6 412 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 VPS35Q96QK1 796 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 TEX101Q9BY14 249 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 PHPT1Q9NRX4 125 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 GPR27Q9NS67 375 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 SLC30A1Q9Y6M5 507 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 CACNB4O00305 520 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 VILLO15195 856 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 BANF1O75531 89 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 LMNAP02545 664 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 MYCLP1P12525 358 aaPredicted RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 TNFRSF8P28908 595 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 ECHS1P30084 290 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 MC4RP32245 332 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 KIAA1024LP59773 190 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 PEX6Q13608 980 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 CHRNA6Q15825 494 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 DUOXA1Q1HG43 343 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 ANKRD20A4Q4UJ75 823 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 PELI3Q8N2H9 469 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 GPR161Q8N6U8 529 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 KLHDC7BQ96G42 594 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 SGSM3Q96HU1 749 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 TBATAQ96M53 351 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 AGAP2Q99490 1192 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 SAYSD1Q9NPB0 183 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 ZC3H7BQ9UGR2 993 aaKnown RBP16.98■□□□□ 0.31
NUP88-210ENST00000574867 CHMP2BQ9UQN3 213 aa16.98■□□□□ 0.31
NUP88-210ENST00000574867 FADS2P1A8MWK0 482 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 CCL22O00626 93 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 THEGLP0DJG4 465 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 ARSDP51689 593 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 CDK3Q00526 305 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 NFATC2Q13469 925 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 GPR33Q49SQ1 333 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 SPANXN3Q5MJ09 141 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 Q6ZSR6 202 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 SNX20Q7Z614 316 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 PHYKPLQ8IUZ5 450 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 FBXO36Q8NEA4 188 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 OR13H1Q8NG92 308 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 HDAC10Q969S8 669 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 ULK4Q96C45 1275 aa16.97■□□□□ 0.31
NUP88-210ENST00000574867 HIC2Q96JB3 615 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms