RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
CTNS-208ENST00000574218 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 TRAFD1O14545 582 aaPredicted RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 GFPT2O94808 682 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 MT-ND3P03897 115 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 PGDP52209 483 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 FMO1Q01740 532 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 IL10RBQ08334 325 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 LBRQ14739 615 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 PYCR3Q53H96 274 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 TMCO4Q5TGY1 634 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 CYB5D1Q6P9G0 228 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 Q6ZVL8 140 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 GALNT6Q8NCL4 622 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 C3orf20Q8ND61 904 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 SEC14L1Q92503 715 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 AP2M1Q96CW1 435 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 HERPUD2Q9BSE4 406 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 DHX35Q9H5Z1 703 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 IGSF5Q9NSI5 407 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 ZNHIT2Q9UHR6 403 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 CD84Q9UIB8 345 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 LNPEPQ9UIQ6 1025 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 NOCTQ9UK39 431 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 ST14Q9Y5Y6 855 aa11.85□□□□□ -0.51
CTNS-208ENST00000574218 PRRC2CQ9Y520 2896 aaKnown RBP11.85□□□□□ -0.51
CTNS-208ENST00000574218 SIGLEC16A6NMB1 481 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 EIF3CLB5ME19 914 aaKnown RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 SNX2O60749 519 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 SEMA7AO75326 666 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 LRCH4O75427 683 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 CREG1O75629 220 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 KIAA0754O94854 1291 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 NDUFA10O95299 355 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 F8A1P23610 371 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 GSCP56915 257 aaPredicted RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 DPTQ07507 201 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 DNASE1L3Q13609 305 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 ADAMTSL4Q6UY14 1074 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 MAMDC2Q7Z304 686 aaPredicted RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 RNF31Q96EP0 1072 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 SCARF2Q96GP6 870 aaPredicted RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 MCEEQ96PE7 176 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 PSKH2Q96QS6 385 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 EIF3CQ99613 913 aaKnown RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 SLC25A23Q9BV35 468 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 NAA15Q9BXJ9 866 aaKnown RBP11.84□□□□□ -0.51
CTNS-208ENST00000574218 VPS16Q9H269 839 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 AP4E1Q9UPM8 1137 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 PCDHGC4Q9Y5F7 938 aa11.84□□□□□ -0.51
CTNS-208ENST00000574218 KIR2DS5A0A0G2JLQ3 304 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 A0A0G2JNG1 304 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 OR5K4A6NMS3 321 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 KIR2DS3K7RE56 304 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 RASSF9O75901 435 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 FURINP09958 794 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 ANKRD34CP0C6C1 535 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 VARSP26640 1264 aaKnown RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 GARSP41250 739 aaKnown RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 SEPHS1P49903 392 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 SEMA5AQ13591 1074 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 KIR2DS5Q14953 304 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 ARMC12Q5T9G4 340 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 CHST15Q7LFX5 561 aaPredicted RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 TRIM74Q86UV6 250 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 APLFQ8IW19 511 aaPredicted RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 MLKLQ8NB16 471 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 FNIP1Q8TF40 1166 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 ZNF599Q96NL3 588 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 OR6C1Q96RD1 312 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 ACSS2Q9NR19 701 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 GPATCH2LQ9NWQ4 482 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 RCOR3Q9P2K3 495 aaPredicted RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 PADI1Q9ULC6 663 aa11.83□□□□□ -0.52
CTNS-208ENST00000574218 MN1Q10571 1320 aaPredicted RBP11.83□□□□□ -0.52
CTNS-208ENST00000574218 TTC24A2A3L6 582 aaPredicted RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 NPIPB15A6NHN6 443 aaPredicted RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 RECKO95980 971 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 TPM2P07951 284 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 UNGP13051 313 aaPredicted RBP11.82□□□□□ -0.52
CTNS-208ENST00000574218 ZNF28P17035 718 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 AMD1P17707 334 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 CHRNB2P17787 502 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 CTPS1P17812 591 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 ERCC2P18074 760 aa11.82□□□□□ -0.52
CTNS-208ENST00000574218 LHCGRP22888 699 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms