RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SPAARA0A1B0GVQ0 90 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 TNFRSF10CO14798 259 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 FLRT2O43155 660 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SUN1O94901 812 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 TNFP01375 233 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 KRT14P02533 472 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 CSF2P04141 144 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 ZSCAN5DPP0CG00 497 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 MYCLP1P12525 358 aaPredicted RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 ETS1P14921 441 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 CHRNA4P43681 627 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 PPARDQ03181 441 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 FZD2Q14332 565 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 HENMT1Q5T8I9 393 aaKnown RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 FAXCQ5TGI0 409 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 PDPK2PQ6A1A2 396 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 ENPP7Q6UWV6 458 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 ADAMTSL4Q6UY14 1074 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 DBX2Q6ZNG2 339 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 CREG2Q8IUH2 290 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SLC22A18ASQ8N1D0 253 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 TTC30BQ8N4P2 665 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 DTX3LQ8TDB6 740 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 FUBP1Q96AE4 644 aaKnown RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 CAPZA3Q96KX2 299 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 TBATAQ96M53 351 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 WDR92Q96MX6 357 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 PLEKHG4BQ96PX9 1271 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 RIOK2Q9BVS4 552 aaKnown RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 TEX101Q9BY14 249 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SLC13A1Q9BZW2 595 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 EIF2B3Q9NR50 452 aaKnown RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 KLK13Q9UKR3 277 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 OR1A2Q9Y585 309 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SPO11Q9Y5K1 396 aa10.98□□□□□ -0.65
CHD3-216ENST00000573936 SETXQ7Z333 2677 aaKnown RBP10.98□□□□□ -0.65
CHD3-216ENST00000573936 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 NEMP2A6NFY4 417 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 CCDC188H7C350 402 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 STX7O15400 261 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 RASGRP1O95267 797 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 ECEL1O95672 775 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SLC4A1P02730 911 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 CD59P13987 128 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 NME1P15531 152 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 JUNDP17535 347 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 LPOP22079 712 aaPredicted RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 EPHA8P29322 1005 aaPredicted RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 SRP54P61011 504 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 BASP1P80723 227 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 SARNPP82979 210 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 CDK3Q00526 305 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 CDK16Q00536 496 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 CDH17Q12864 832 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 EIF2B5Q13144 721 aaKnown RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 SPARCL1Q14515 664 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SHBQ15464 509 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 PRAMEF14Q5SWL7 426 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 DENND5AQ6IQ26 1287 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 RFLNAQ6ZTI6 216 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 PIP4P1Q86T03 277 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 HEATR4Q86WZ0 1026 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 TAB3Q8N5C8 712 aaPredicted RBP10.97□□□□□ -0.65
CHD3-216ENST00000573936 TRAM1L1Q8N609 369 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 DNAAF3Q8N9W5 541 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 GLIS1Q8NBF1 620 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 GPR26Q8NDV2 337 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 OR56A4Q8NGH8 313 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SAP25Q8TEE9 199 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 ZNF592Q92610 1267 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SCAMP4Q969E2 229 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 EID2BQ96D98 161 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 HIC2Q96JB3 615 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 APOL2Q9BQE5 337 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 ZSCAN5AQ9BUG6 496 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SPATA16Q9BXB7 569 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 IL17CQ9P0M4 197 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SPASTQ9UBP0 616 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 KLQ9UEF7 1012 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 CSNK1G3Q9Y6M4 447 aa10.97□□□□□ -0.65
CHD3-216ENST00000573936 SMG1Q96Q15 3661 aaKnown RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 K7ESM1 405 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 AURKAO14965 403 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 USP12O75317 370 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 PIAS2O75928 621 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 APRTP07741 180 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 ALPPL2P10696 532 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 CTSEP14091 401 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 BPIP17213 487 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 DGKAP23743 735 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 SPAM1P38567 509 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 HADHAP40939 763 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 GRK6P43250 576 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 HK3P52790 923 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms