RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 VPS33AQ96AX1 596 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 TEX37Q96LM6 180 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 SLC45A1Q9Y2W3 748 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 GIT1Q9Y2X7 761 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 ASPDHA6ND91 283 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 TNPO2O14787 897 aaKnown RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 CD3EAPO15446 510 aaKnown RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 CLOCKO15516 846 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 FOXD2O60548 495 aaPredicted RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 CLASP2O75122 1294 aaKnown RBP19■□□□□ 0.63
SCARF1-206ENST00000573852 HOXC8P31273 242 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 GSK3BP49841 420 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 PMS2P3Q13401 168 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 ELMSAN1Q6PJG2 1045 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF354CQ86Y25 554 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF683Q8IZ20 524 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 SP110Q9HB58 689 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 GPR45Q9Y5Y3 372 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 DOCK4Q8N1I0 1966 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 PATJQ8NI35 1801 aa19■□□□□ 0.63
SCARF1-206ENST00000573852 CCDC162PA2VCL2 907 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 ATE1O95260 518 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 GLP2RO95838 553 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 VARSP26640 1264 aaKnown RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 CPT1AP50416 773 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 CACNB2Q08289 660 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 OVOS1Q6IE37 1185 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 DCP1BQ8IZD4 617 aaKnown RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 SEPT8Q92599 483 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 C1orf74Q96LT6 269 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 SOX17Q9H6I2 414 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 CXorf21Q9HAI6 301 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 LOC285095A0A1B0GVY8 99 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 TCRBV5S2A0A599 114 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 F8W810 466 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 ITGB1P05556 798 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 PRSS56P0CW18 603 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 TMTC4Q5T4D3 741 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 TADA1Q96BN2 335 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 HIPK3Q9H422 1215 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 PLGRKTQ9HBL7 147 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 SEMA4BQ9NPR2 832 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 TIMM22Q9Y584 194 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 FADS3Q9Y5Q0 445 aa18.99■□□□□ 0.63
SCARF1-206ENST00000573852 OAS3Q9Y6K5 1087 aaKnown RBP18.99■□□□□ 0.63
SCARF1-206ENST00000573852 ZNF701M0R085 212 aaPredicted RBP18.98■□□□□ 0.63
SCARF1-206ENST00000573852 GPIP06744 558 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 CES1P23141 567 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 EEF1DP29692 281 aaKnown RBP18.98■□□□□ 0.63
SCARF1-206ENST00000573852 SUOXP51687 545 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 CLCQ05315 142 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 NFYCQ13952 458 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 PAGE3Q5JUK9 113 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 TEX26Q8N6G2 289 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 OR13C4Q8NGS5 318 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 BLOC1S5Q8TDH9 187 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 ALG2Q9H553 416 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 IKZF3Q9UKT9 509 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 USP22Q9UPT9 525 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 MT-ND1P03886 318 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 PIRTP0C851 137 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 IDO1P14902 403 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 RFC2P35250 354 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 ZFP36L2P47974 494 aaKnown RBP18.98■□□□□ 0.63
SCARF1-206ENST00000573852 ACVR1Q04771 509 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 LIPEQ05469 1076 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 FUT11Q495W5 492 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 CYBRD1Q53TN4 286 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 SPATA2LQ8IUW3 424 aaPredicted RBP18.98■□□□□ 0.63
SCARF1-206ENST00000573852 RHEBL1Q8TAI7 183 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 SERPINB11Q96P15 392 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 FNIP2Q9P278 1114 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 ZNHIT2Q9UHR6 403 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 CEP350Q5VT06 3117 aa18.98■□□□□ 0.63
SCARF1-206ENST00000573852 A0A1W2PP18 115 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 OR4Q2P0C623 313 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 RHOQP17081 205 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 FOXM1Q08050 763 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 C16orf72Q14CZ0 275 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 COQ5Q5HYK3 327 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SDHAF4Q5VUM1 108 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SNRNP27Q8WVK2 155 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 RSPH1Q8WYR4 309 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 FATE1Q969F0 183 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SLC39A13Q96H72 371 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TMEM74Q96NL1 305 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TRIM54Q9BYV2 358 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 ZYG11BQ9C0D3 744 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TFB2MQ9H5Q4 396 aaKnown RBP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SLAMF8Q9P0V8 285 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 CDH7Q9ULB5 785 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 TRPV2Q9Y5S1 764 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 MYO16Q9Y6X6 1858 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 ANKRD12Q6UB98 2062 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SUPT3HB4E1H0 165 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 M0QZ92 97 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 M0QZQ0 153 aa18.97■□□□□ 0.63
SCARF1-206ENST00000573852 SUPT3HO75486 399 aa18.97■□□□□ 0.63
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