RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 TDRD1Q9BXT4 1180 aaKnown RBP9.07□□□□□ -0.96
NDE1-207ENST00000573203 CLPBQ9H078 707 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 WDR26Q9H7D7 661 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 PCDH9Q9HC56 1237 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 ARFGAP3Q9NP61 516 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 PHPT1Q9NRX4 125 aaPredicted RBP9.07□□□□□ -0.96
NDE1-207ENST00000573203 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.07□□□□□ -0.96
NDE1-207ENST00000573203 MOSPD1Q9UJG1 213 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 DNPEPQ9ULA0 475 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.07□□□□□ -0.96
NDE1-207ENST00000573203 V9GYY5 206 aaPredicted RBP9.07□□□□□ -0.96
NDE1-207ENST00000573203 KNTC1P50748 2209 aa9.07□□□□□ -0.96
NDE1-207ENST00000573203 LY6G6EA0A0G2JKS1 128 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 A0A0U1RQS6 177 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CPED1A4D0V7 1026 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 TRABD2BA6NFA1 517 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 TMEM202A6NGA9 273 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PGRMC1O00264 195 aaKnown RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 YY2O15391 372 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CST8O60676 142 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 GP1BAP07359 652 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CELA2BP08218 269 aaPredicted RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 HOXC4P09017 264 aaPredicted RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 ZNF30P17039 623 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 NR2C2P49116 596 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 RPL26P61254 145 aaKnown RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 TARDBPQ13148 414 aaKnown RBP eCLIP9.06□□□□□ -0.96
NDE1-207ENST00000573203 IHHQ14623 411 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 TFDP3Q5H9I0 405 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 LRRC66Q68CR7 880 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 RAET1GQ6H3X3 334 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 GUSBP11Q6P575 273 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 Q6ZVL8 140 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 B4GALNT4Q76KP1 1039 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 GKN2Q86XP6 184 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 KATNAL2Q8IYT4 538 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 RCOR2Q8IZ40 523 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CBARPQ8N350 705 aaPredicted RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 SDR16C5Q8N3Y7 309 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CNTD1Q8N815 330 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 MDM1Q8TC05 714 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 OR1E3Q8WZA6 343 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PDXPQ96GD0 296 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 RBM41Q96IZ5 413 aaKnown RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 AGAP3Q96P47 875 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 OLFM3Q96PB7 478 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 SMIM14Q96QK8 99 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 BOCQ9BWV1 1114 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 LGR4Q9BXB1 951 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 CEP41Q9BYV8 373 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 ABCG4Q9H172 646 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 RPL26L1Q9UNX3 145 aaKnown RBP9.06□□□□□ -0.96
NDE1-207ENST00000573203 CLCA2Q9UQC9 943 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PCDHA3Q9Y5H8 950 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 DGKBQ9Y6T7 804 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 U3KQA8 63 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 ASPMQ8IZT6 3477 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 DMXL2Q8TDJ6 3036 aa9.06□□□□□ -0.96
NDE1-207ENST00000573203 PRSS38A1L453 326 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 EME2A4GXA9 379 aaPredicted RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 CAPN8A6NHC0 703 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 TNFRSF10CO14798 259 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 OPA1O60313 960 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 KRT37O76014 449 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 CLDN7O95471 211 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MT-CO3P00414 261 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 PRLP01236 227 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MMP2P08253 660 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MYCLP1P12525 358 aaPredicted RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 TGM2P21980 687 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 CXCR5P32302 372 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 GPR1P46091 355 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MARCKSL1P49006 195 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 STC1P52823 247 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 SKOR1P84550 965 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 PTSQ03393 145 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 DPTQ07507 201 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 CYP4F3Q08477 520 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 TAZQ16635 292 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MAP9Q49MG5 647 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 BEND6Q5SZJ8 279 aaPredicted RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 FAM182AQ5T1J6 154 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 LVRNQ6Q4G3 990 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 RFLNAQ6ZTI6 216 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 EFL1Q7Z2Z2 1120 aaKnown RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 TECPR1Q7Z6L1 1165 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 TAF8Q7Z7C8 310 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 SLC35F3Q8IY50 421 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 EXD1Q8NHP7 514 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 MAPK15Q8TD08 544 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 TFB1MQ8WVM0 346 aaKnown RBP9.05□□□□□ -0.96
NDE1-207ENST00000573203 KRT35Q92764 455 aa9.05□□□□□ -0.96
NDE1-207ENST00000573203 P3H4Q92791 437 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms