RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 NOBOXO60393 691 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ITGAVP06756 1048 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 CYP2A6P11509 494 aaPredicted RBP8.65□□□□□ -1.02
SMG6-210ENST00000572205 CKMT1AP12532 417 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 XPAP23025 273 aaPredicted RBP8.65□□□□□ -1.02
SMG6-210ENST00000572205 SPINT3P49223 89 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 WNT3AP56704 352 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 DCDC1P59894 354 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 HNRNPKP61978 463 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-210ENST00000572205 CDK18Q07002 472 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 KHDC1Q4VXA5 237 aaKnown RBP8.65□□□□□ -1.02
SMG6-210ENST00000572205 OXLD1Q5BKU9 147 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 SIRPB2Q5JXA9 342 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ZFYVE27Q5T4F4 411 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 CFAP58Q5T655 872 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 CDCP2Q5VXM1 449 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 PEX26Q7Z412 305 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 TMC3Q7Z5M5 1100 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 TRIM74Q86UV6 250 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 NLRP8Q86W28 1048 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
SMG6-210ENST00000572205 CCDC50Q8IVM0 306 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 GLIS1Q8NBF1 620 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 KYQ8NBH2 561 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 GPR26Q8NDV2 337 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ARMC2Q8NEN0 867 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 CCL4L1Q8NHW4 92 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 NSMCE1Q8WV22 266 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ATG4AQ8WYN0 398 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 P3H4Q92791 437 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 TSACCQ96A04 125 aaPredicted RBP8.65□□□□□ -1.02
SMG6-210ENST00000572205 APOLD1Q96LR9 279 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 WDR92Q96MX6 357 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 C1QTNF7Q9BXJ2 289 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 WDR26Q9H7D7 661 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 UBP1Q9NZI7 540 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 EGFL7Q9UHF1 273 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 PPP2R2CQ9Y2T4 447 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-210ENST00000572205 MSRB2Q9Y3D2 182 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 ZNF711Q9Y462 761 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
SMG6-210ENST00000572205 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.03
SMG6-210ENST00000572205 KNTC1P50748 2209 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 PRSS38A1L453 326 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 A6NCN8 305 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 TPP1O14773 563 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 TNFRSF10CO14798 259 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 YY2O15391 372 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 KALRNO60229 2985 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 DNAJC6O75061 913 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 RFPL3O75679 317 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 NDST3O95803 873 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 C1QTNF9P0C862 333 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 RBP3P10745 1247 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 BPIP17213 487 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 PSMB4P28070 264 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 SRP54P61011 504 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 ITKQ08881 620 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 C1orf61Q13536 156 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 ACOX1Q15067 660 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 SLC1A5Q15758 541 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 DEFB133Q30KQ1 61 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 INAVAQ3KP66 663 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 PERM1Q5SV97 790 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 ZCCHC8Q6NZY4 707 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 GUSBP11Q6P575 273 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 DHRS13Q6UX07 377 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 RANBP10Q6VN20 620 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 CCNI2Q6ZMN8 369 aaPredicted RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 GPR156Q8NFN8 814 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 OR56A4Q8NGH8 313 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 SPATA13Q96N96 652 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 VAT1Q99536 393 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 RIOK2Q9BVS4 552 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 MAK16Q9BXY0 300 aaKnown RBP8.64□□□□□ -1.03
SMG6-210ENST00000572205 TMEM168Q9H0V1 697 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 MAGEE1Q9HCI5 957 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 SEPT10Q9P0V9 454 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 DNPEPQ9ULA0 475 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
SMG6-210ENST00000572205 EME2A4GXA9 379 aaPredicted RBP8.63□□□□□ -1.03
SMG6-210ENST00000572205 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 MTSS1O43312 755 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 LIASO43766 372 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 ICMTO60725 284 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 PMPCBO75439 489 aa8.63□□□□□ -1.03
SMG6-210ENST00000572205 TRIM16O95361 564 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms