RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 LIMD1Q9UGP4 676 aa15.27■□□□□ 0.03
USP43-202ENST00000570475 BOLA2-SMG1P6H3BVE0 249 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 OR4F21O95013 312 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 IST1P53990 364 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 NUP107P57740 925 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 PFKPQ01813 784 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 ANKDD1AQ495B1 522 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 C16orf59Q7L2K0 433 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SAPCD2Q86UD0 394 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 CMTR2Q8IYT2 770 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 LGI2Q8N0V4 545 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 OR7D4Q8NG98 312 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 OR4L1Q8NH43 312 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 RIN3Q8TB24 985 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SLCO4A1Q96BD0 722 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 BEGAINQ9BUH8 593 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 ZYG11BQ9C0D3 744 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 TAS2R13Q9NYV9 303 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 EIF2B4Q9UI10 523 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 TRMT6Q9UJA5 497 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 GPR39O43194 453 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 NOBOXO60393 691 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SERPINF2P08697 491 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SLC2A4P14672 509 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 DNAJB2P25686 324 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 GSK3BP49841 420 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 HK2P52789 917 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 HERVK_113P63132 956 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 MRPS6P82932 125 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 SCAPQ12770 1279 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SLC44A4Q53GD3 710 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SLC2A7Q6PXP3 512 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 GLT6D1Q7Z4J2 308 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 ERVK-6Q9BXR3 956 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 OLAHQ9NV23 265 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 A0A1B0GTL3 188 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 GABRDO14764 452 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 CNPP09543 421 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 ELK4P28324 431 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 MYBPC3Q14896 1274 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 ACBD5Q5T8D3 534 aaPredicted RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 FAM45BPQ6NSW5 357 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 AGMOQ6ZNB7 445 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 FUNDC1Q8IVP5 155 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 CHERPQ8IWX8 916 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 OR6K2Q8NGY2 324 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 FAM45AQ8TCE6 357 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SERPINB11Q96P15 392 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 ARMC7Q9H6L4 198 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 SPC25Q9HBM1 224 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 INTS7Q9NVH2 962 aaKnown RBP15.26■□□□□ 0.03
USP43-202ENST00000570475 ZNHIT2Q9UHR6 403 aa15.26■□□□□ 0.03
USP43-202ENST00000570475 MYO1GB0I1T2 1018 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 TOR1BO14657 336 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 NIPSNAP2O75323 286 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 SH3BGRLO75368 114 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 ZNF182P17025 639 aaPredicted RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 CDKN1CP49918 316 aaPredicted RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 C21orf59P57076 290 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 GNA12Q03113 381 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 GTF2H3Q13889 308 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 PERM1Q5SV97 790 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 OGFOD2Q6N063 350 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 ERMP1Q7Z2K6 904 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 PATL1Q86TB9 770 aaKnown RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 CHID1Q9BWS9 393 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 LATS2Q9NRM7 1088 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 POLG2Q9UHN1 485 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 PADI3Q9ULW8 664 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 SYCE1LA8MT33 242 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 NT5C1B-RDH14C9J2C7 533 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 H0Y626 953 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 STX7O15400 261 aaKnown RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 TRIM16O95361 564 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 S1PR4O95977 384 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 ALDH4A1P30038 563 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 SEMG2Q02383 582 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 DGCR6Q14129 220 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 TBC1D25Q3MII6 688 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 PM20D1Q6GTS8 502 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 ABRAXAS1Q6UWZ7 409 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 SIDT2Q8NBJ9 832 aaKnown RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 DDHD1Q8NEL9 900 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 HMGCLL1Q8TB92 370 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 STAG3L4Q8TBR4 150 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 GAB3Q8WWW8 586 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 ISL2Q96A47 359 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 PARK7Q99497 189 aaKnown RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 MEAF6Q9HAF1 191 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 TARM1B6A8C7 271 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 S100BP04271 92 aaPredicted RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 RPS9P46781 194 aaKnown RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 CREB5Q02930 508 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 CHRNB3Q05901 458 aa15.25■□□□□ 0.03
USP43-202ENST00000570475 TSTA3Q13630 321 aaPredicted RBP15.25■□□□□ 0.03
USP43-202ENST00000570475 FGD3Q5JSP0 725 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms