RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CCDC173Q0VFZ6 552 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TCEA2Q15560 299 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PYCR3Q53H96 274 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 B3GNT8Q7Z7M8 397 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SLITRK4Q8IW52 837 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CCDC170Q8IYT3 715 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 LPCAT1Q8NF37 534 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZDHHC1Q8WTX9 485 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PTCD2Q8WV60 388 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 KCNE4Q8WWG9 221 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 OR2M4Q96R27 311 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 B3GNT4Q9C0J1 378 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RMI1Q9H9A7 625 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CD84Q9UIB8 345 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MOSPD1Q9UJG1 213 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 A0A0U1RQS6 177 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 C1orf232A0A0U1RR37 186 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 POLD2P49005 469 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 DCDC1P59894 354 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 AP1B1Q10567 949 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TFDP2Q14188 446 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PRKD1Q15139 912 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TEX44Q53QW1 395 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MFSD7Q6UXD7 560 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NT5DC3Q86UY8 548 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SFTPA2Q8IWL1 248 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NAGSQ8N159 534 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CCHCR1Q8TD31 782 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 LRRN4Q8WUT4 740 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FCRL3Q96P31 734 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 BBC3Q96PG8 261 aaPredicted RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SRPK1Q96SB4 655 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 AGAP2Q99490 1192 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MAGEE1Q9HCI5 957 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PKD2L2Q9NZM6 624 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CNOT6Q9ULM6 557 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ATMQ13315 3056 aa16.98■□□□□ 0.31
MAP1LC3B-208ENST00000570189 AHCTF1Q8WYP5 2266 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GOLGA6CA6NDK9 693 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GOLGA6BA6NDN3 693 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GPR89AB7ZAQ6 455 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SPOPO43791 374 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 DNAJC6O75061 913 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CPNE6O95741 557 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GPR89BP0CG08 455 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GOLGA6DP0CG33 693 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FECHP22830 423 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 AK4P27144 223 aaPredicted RBP16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 UGT1A5P35504 534 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FASLGP48023 281 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TMPRSS3P57727 454 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 BROXQ5VW32 411 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PDPK2PQ6A1A2 396 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 C11orf63Q6NUN7 778 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RAB11FIP2Q7L804 512 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GPR155Q7Z3F1 870 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RFX6Q8HWS3 928 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 KATNAL2Q8IYT4 538 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FAM83DQ9H4H8 585 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RAD18Q9NS91 495 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GOLGA6AQ9NYA3 693 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ALG6Q9Y672 507 aa16.97■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PMS2P1A4D2B8 440 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NVLO15381 856 aaKnown RBP16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MTSS1O43312 755 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TNFSF15O95150 251 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ECEL1O95672 775 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MAGEA1P43355 309 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ODF2Q5BJF6 829 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TFDP3Q5H9I0 405 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SLC30A9Q6PML9 568 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NPNTQ6UXI9 565 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GALNT13Q8IUC8 556 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FBXO39Q8N4B4 442 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RNF25Q96BH1 459 aaPredicted RBP16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 EID2BQ96D98 161 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TEKT5Q96M29 485 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 DPYSL5Q9BPU6 564 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SYNDIG1Q9H7V2 258 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZFYVE1Q9HBF4 777 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 EPB41L5Q9HCM4 733 aa16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 LUC7LQ9NQ29 371 aaKnown RBP16.96■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FADS2P1A8MWK0 482 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ATXN7O15265 892 aaPredicted RBP16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 B4GAT1O43505 415 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 KALRNO60229 2985 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 PTPN3P26045 913 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ACTR1BP42025 376 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 CLCNKAP51800 687 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 MAZP56270 477 aaKnown RBP16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 ACTR1AP61163 376 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 CDK18Q07002 472 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SPOCD1Q6ZMY3 1216 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 LYSMD3Q7Z3D4 306 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 TMC3Q7Z5M5 1100 aa16.95■□□□□ 0.3
MAP1LC3B-208ENST00000570189 SFRP1Q8N474 314 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms