RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RENBPP51606 427 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 FOXK1P85037 733 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ITKQ08881 620 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 CDC20Q12834 499 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ARMC12Q5T9G4 340 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 APTXQ7Z2E3 356 aaKnown RBP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 IRF2BP2Q7Z5L9 587 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 GALNT13Q8IUC8 556 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ATPAF2Q8N5M1 289 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 PIH1D2Q8WWB5 315 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 NCSTNQ92542 709 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF653Q96CK0 615 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 BTBD6Q96KE9 485 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 RIOK2Q9BVS4 552 aaKnown RBP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 TBC1D10AQ9BXI6 508 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 B3GNT4Q9C0J1 378 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 DONSONQ9NYP3 566 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 LIMA1Q9UHB6 759 aaKnown RBP11.99□□□□□ -0.49
CAPN3-220ENST00000569827 ZNHIT2Q9UHR6 403 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 TTLL3Q9Y4R7 772 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
CAPN3-220ENST00000569827 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 B4E171 279 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 H3BRJ5 948 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 RNF8O76064 485 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 STK17BO94768 372 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ACP5P13686 325 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF28P17035 718 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 F8A1P23610 371 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 TSPAN7P41732 249 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 MMP13P45452 471 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 GFERP55789 205 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 DSC2Q02487 901 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 HHEXQ03014 270 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF648Q5T619 568 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 USP45Q70EL2 814 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 CHST15Q7LFX5 561 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 KDELC2Q7Z4H8 507 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 NLGN4XQ8N0W4 816 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 NLGN4YQ8NFZ3 816 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 OR10G6Q8NH81 332 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 STARD8Q92502 1023 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 SCRN2Q96FV2 425 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 SCARF2Q96GP6 870 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 SLC45A3Q96JT2 553 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF599Q96NL3 588 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 CSPG4P5Q96PW8 444 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 ERGIC2Q96RQ1 377 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 MCCC1Q96RQ3 725 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 HSD3B7Q9H2F3 369 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPN3-220ENST00000569827 TBC1D29Q9UFV1 150 aa11.98□□□□□ -0.49
CAPN3-220ENST00000569827 PSMD11O00231 422 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 ZW10O43264 779 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 MTSS1O43312 755 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 MFSD11O43934 449 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 FTLP02792 175 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 ARL4AP40617 200 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CASRP41180 1078 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 FASLGP48023 281 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 RAB15P59190 212 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 PTSQ03393 145 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CLPPQ16740 277 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 PLA2G4EQ3MJ16 856 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 ADAMTSL4Q6UY14 1074 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 POLNQ7Z5Q5 900 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 TMEM135Q86UB9 458 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CPNE8Q86YQ8 564 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 SFRP1Q8N474 314 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 ASPSCR1Q9BZE9 553 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 SPRY4Q9C004 299 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 HAUS4Q9H6D7 363 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CHMP5Q9NZZ3 219 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 CHKBQ9Y259 395 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 TP53TG5Q9Y2B4 290 aa11.97□□□□□ -0.49
CAPN3-220ENST00000569827 MDC1Q14676 2089 aaKnown RBP11.97□□□□□ -0.49
CAPN3-220ENST00000569827 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 BLACEA4D250 179 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 PRR19A6NJB7 356 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 FADS2P1A8MWK0 482 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 EIF3CLB5ME19 914 aaKnown RBP11.96□□□□□ -0.49
CAPN3-220ENST00000569827 DDX3XO00571 662 aaKnown RBP eCLIP11.96□□□□□ -0.49
CAPN3-220ENST00000569827 DNAJC6O75061 913 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 CLDN7O95471 211 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 TRBC1P01850 177 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 CD48P09326 243 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 FURINP09958 794 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 RARAP10276 462 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 SKILP12757 684 aa11.96□□□□□ -0.49
CAPN3-220ENST00000569827 TEAD1P28347 426 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms