RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 EIF3IQ13347 325 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 ARHGEF7Q14155 803 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 SLC18A3Q16572 532 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 HADHQ16836 314 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 AMZ1Q400G9 498 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 PYCR3Q53H96 274 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 NKAIN2Q5VXU1 208 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 USP53Q70EK8 1073 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 B4GALNT4Q76KP1 1039 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 MARK2Q7KZI7 788 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 ZFAND4Q86XD8 727 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF761Q86XN6 746 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 JAMLQ86YT9 394 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 RCBTB1Q8NDN9 531 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 NSMCE1Q8WV22 266 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 HDAC11Q96DB2 347 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 OR2M4Q96R27 311 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 CHP1Q99653 195 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 CEP41Q9BYV8 373 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 STRADBQ9C0K7 418 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 PRKAB1Q9Y478 270 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 TTLL3Q9Y4R7 772 aa13.77□□□□□ -0.21
GTF3C1-211ENST00000569653 MYO18BQ8IUG5 2567 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 IGHV5-10-1A0A0J9YXX1 117 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 KCNK1O00180 336 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 INPP4BO15327 924 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 NVLO15381 856 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 KDELR1P24390 212 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ALDH4A1P30038 563 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ACTR1BP42025 376 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ACTR1AP61163 376 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 PDK2Q15119 407 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 QPCTQ16769 361 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 PHF19Q5T6S3 580 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 NPNTQ6UXI9 565 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF765Q7L2R6 523 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 VASH2Q86V25 355 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 LPCAT1Q8NF37 534 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 KIAA1524Q8TCG1 905 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 USP7Q93009 1102 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 LYSMD1Q96S90 227 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 UVRAGQ9P2Y5 699 aa13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-211ENST00000569653 TRBV23OR9-2A0A075B6M9 112 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 DNAJC6O75061 913 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CPNE6O95741 557 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 JCHAINP01591 159 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 ATP1A1P05023 1023 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 JMJD7P0C870 316 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 MPSTP25325 297 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 MAN1A1P33908 653 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CD86P42081 329 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 PPIDQ08752 370 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 MESDQ14696 234 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 LINC00303Q3SY05 128 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 MAP9Q49MG5 647 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 TAF1BQ53T94 588 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 HENMT1Q5T8I9 393 aaKnown RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 SARM1Q6SZW1 724 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CCDC81Q6ZN84 652 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 NLRP8Q86W28 1048 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 DTX1Q86Y01 620 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CCDC13Q8IYE1 715 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 OR8K1Q8NGG5 319 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 SLC37A2Q8TED4 501 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CCDC74BQ96LY2 380 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 RNF157Q96PX1 679 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 TRIB3Q96RU7 358 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 CCNL2Q96S94 520 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 SPTLC3Q9NUV7 552 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 KCTD5Q9NXV2 234 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 SPTA1P02549 2419 aa13.75□□□□□ -0.21
GTF3C1-211ENST00000569653 C1orf232A0A0U1RR37 186 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 A6NCN8 305 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 RHPN2P1A8MT19 583 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 H2AFZP0C0S5 128 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 TMEM253P0C7T8 217 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 LIPCP11150 499 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 FGF3P11487 239 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF30P17039 623 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 NOP2P46087 812 aaKnown RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 SPINT3P49223 89 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 MAPK10P53779 464 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 EPHB1P54762 984 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 GALNT3Q14435 633 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 ZNF648Q5T619 568 aaPredicted RBP13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 SLC9A4Q6AI14 798 aa13.74□□□□□ -0.21
GTF3C1-211ENST00000569653 H2AFVQ71UI9 128 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms