RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TCAF1Q9Y4C2 921 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 HS3ST3A1Q9Y663 406 aa15.98■□□□□ 0.15
USB1-215ENST00000569252 LAMA5O15230 3695 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 DMXL2Q8TDJ6 3036 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 A0A0U1RQS6 177 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 ESYT3A0FGR9 886 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 LATO43561 262 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
USB1-215ENST00000569252 MAGEC1O60732 1142 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 IGHV4-34P06331 123 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 C1SP09871 688 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 MCM3P25205 808 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SPAM1P38567 509 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 GPR1P46091 355 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 MTM1Q13496 603 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 AGERQ15109 404 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 TEAD4Q15561 434 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 ZNF765Q7L2R6 523 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 TECPR1Q7Z6L1 1165 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 RABEPKQ7Z6M1 372 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 NLRP8Q86W28 1048 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 CBARPQ8N350 705 aaPredicted RBP15.97■□□□□ 0.15
USB1-215ENST00000569252 TTC30BQ8N4P2 665 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 DENND6BQ8NEG7 585 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SEC14L1Q92503 715 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 LRRC39Q96DD0 335 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 C19orf43Q9BQ61 176 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SCNM1Q9BWG6 230 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SPATA16Q9BXB7 569 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 CHRAC1Q9NRG0 131 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SYBUQ9NX95 663 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 IL17CQ9P0M4 197 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 CD84Q9UIB8 345 aa15.97■□□□□ 0.15
USB1-215ENST00000569252 SPAARA0A1B0GVQ0 90 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 EIF3HO15372 352 aaKnown RBP eCLIP15.96■□□□□ 0.15
USB1-215ENST00000569252 LDB2O43679 373 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 HYAL3O43820 417 aaPredicted RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 PCCBP05166 539 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 POLBP06746 335 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 TSHRP16473 764 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 MAOBP27338 520 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 PTGER3P43115 390 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 RACK1P63244 317 aaKnown RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 PRAMEP78395 509 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 CRADDP78560 199 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 DHX9Q08211 1270 aaKnown RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 PDIA2Q13087 525 aaKnown RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 ITGA9Q13797 1035 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 FNBP1LQ5T0N5 605 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 TSTD2Q5T7W7 516 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 ALS2CLQ60I27 953 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 RAET1GQ6H3X3 334 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 CCDC25Q86WR0 208 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 SLC41A1Q8IVJ1 513 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 PALM2Q8IXS6 379 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 OR2I1PQ8NGU4 316 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 OR6P1Q8NGX9 317 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 GABPB2Q8TAK5 448 aaPredicted RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 FBXO25Q8TCJ0 367 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 DNASE2BQ8WZ79 361 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 PEX13Q92968 403 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 STAMBPL1Q96FJ0 436 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 PLEKHG4BQ96PX9 1271 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 TTC1Q99614 292 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 MYOCQ99972 504 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 ZSCAN5AQ9BUG6 496 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 ABCG8Q9H221 673 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 MRM3Q9HC36 420 aaKnown RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 TMEM74BQ9NUR3 256 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 NLE1Q9NVX2 485 aaPredicted RBP15.96■□□□□ 0.15
USB1-215ENST00000569252 GRHL1Q9NZI5 618 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 RIMKLBQ9ULI2 386 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 SOX13Q9UN79 622 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 SLC30A1Q9Y6M5 507 aa15.96■□□□□ 0.15
USB1-215ENST00000569252 TNRC6BQ9UPQ9 1833 aaKnown RBP15.96■□□□□ 0.14
USB1-215ENST00000569252 CELSR3Q9NYQ7 3312 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 GLYATL1P3A0A0U1RQE8 302 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 MROH6A6NGR9 719 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 TOR1BO14657 336 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 BCAT2O15382 392 aaPredicted RBP15.95■□□□□ 0.14
USB1-215ENST00000569252 TTC4O95801 387 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 BPIP17213 487 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 DPTQ07507 201 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 MSLNQ13421 630 aaPredicted RBP15.95■□□□□ 0.14
USB1-215ENST00000569252 INPP5AQ14642 412 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 PNCKQ6P2M8 343 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 ZNF534Q76KX8 674 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 SYT12Q8IV01 421 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 LRRN4CLQ8ND94 238 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 CEP76Q8TAP6 659 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 PYROXD1Q8WU10 500 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 GATA6Q92908 595 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.95■□□□□ 0.14
USB1-215ENST00000569252 CENPTQ96BT3 561 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 KLHDC7BQ96G42 594 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 RIOK2Q9BVS4 552 aaKnown RBP15.95■□□□□ 0.14
USB1-215ENST00000569252 KIFC1Q9BW19 673 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 FZD3Q9NPG1 666 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 TMEM9BQ9NQ34 198 aa15.95■□□□□ 0.14
USB1-215ENST00000569252 GDF3Q9NR23 364 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms