RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.09□□□□□ -1.273e-7■■■■■ 41.2
CNOT1-216ENST00000569240 TSPAN33Q86UF1 283 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CUZD1Q86UP6 607 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 INO80EQ8NBZ0 244 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 LRTOMTQ8WZ04 291 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 KLHL6Q8WZ60 621 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HSFY1Q96LI6 401 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DHRS1Q96LJ7 313 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 TAS2R9Q9NYW1 312 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 EDARQ9UNE0 448 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HMX3A6NHT5 357 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 TLL1O43897 1013 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CXCR2P25025 360 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 FOXN2P32314 431 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MAPK8P45983 427 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PGS1Q32NB8 556 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 C1orf189Q5VU69 101 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DPY19L3Q6ZPD9 716 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CYS1Q717R9 158 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GPSM1Q86YR5 675 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 EXOC2Q96KP1 924 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 LHX5Q9H2C1 402 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SIAEQ9HAT2 523 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PRDM5Q9NQX1 630 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 RPS6KB2Q9UBS0 482 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ADGRE2Q9UHX3 823 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HTRA2O43464 458 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MYF6P23409 242 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HOXA13P31271 388 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MATKP42679 507 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 RAB4BP61018 213 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CRY1Q16526 586 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SNAPC1Q16533 368 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SMTNL2Q2TAL5 461 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 TBRG1Q3YBR2 411 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SLX4IPQ5VYV7 408 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PYHIN1Q6K0P9 492 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 RFWD3Q6PCD5 774 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SLC47A2Q86VL8 602 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GALNT13Q8IUC8 556 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PDZD9Q8IXQ8 264 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GTF3C2Q8WUA4 911 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 NCSTNQ92542 709 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SPOCK2Q92563 424 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ALG3Q92685 438 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 C1GALT1C1Q96EU7 318 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HPDLQ96IR7 371 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 NGLY1Q96IV0 654 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MGME1Q9BQP7 344 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ANKRD60Q9BZ19 345 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 NIPAL2Q9H841 368 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CDHR5Q9HBB8 845 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ZIM2Q9NZV7 527 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ADGRB3O60242 1522 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GRXCR2A6NFK2 248 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ERN1O75460 977 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CEP152O94986 1710 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HLA-DPB1P04440 258 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PSKH1P11801 424 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CPB1P15086 417 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ADORA2BP29275 332 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CLCA4Q14CN2 919 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HES5Q5TA89 166 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ZDHHC24Q6UX98 284 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 RETREG3Q86VR2 466 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 AMIGO1Q86WK6 493 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 LACC1Q8IV20 430 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ANGPTL6Q8NI99 470 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GAB3Q8WWW8 586 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MYO19Q96H55 970 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 GPR63Q9BZJ6 419 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 UCKL1Q9NWZ5 548 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 POFUT2Q9Y2G5 429 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 A0A1W2PPW3 197 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 FAM234BA2RU67 622 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ULK1O75385 1050 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 TCP10Q12799 353 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SEMA3AQ14563 771 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 TTLL4Q14679 1199 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 ZYXQ15942 572 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 SUPT20HL1Q3ZLR7 823 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 IL23RQ5VWK5 629 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 IFNL1Q8IU54 200 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 UXS1Q8NBZ7 420 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CEP76Q8TAP6 659 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CSGALNACT1Q8TDX6 532 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DDX17Q92841 729 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 KAT5Q92993 513 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 HEPHQ9BQS7 1158 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 MIEF1Q9NQG6 463 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CISHQ9NSE2 258 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CNOT6Q9ULM6 557 aaKnown RBP7.09□□□□□ -1.27
CNOT1-216ENST00000569240 PPM1HQ9ULR3 514 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 CLCA2Q9UQC9 943 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 DGKBQ9Y6T7 804 aa7.09□□□□□ -1.27
CNOT1-216ENST00000569240 INMT-MINDY4F8WBC2 141 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms