RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 OR6C4Q8NGE1 309 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SPATA22Q8NHS9 363 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 PATE1Q8WXA2 126 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SCG3Q8WXD2 468 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 FGF11Q92914 225 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 LIN37Q96GY3 246 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 ZNF578Q96N58 590 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 AGAP3Q96P47 875 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 BBC3Q96PG8 261 aaPredicted RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 QKIQ96PU8 341 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDH3-209ENST00000569080 PANX2Q96RD6 677 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 RIOK2Q9BVS4 552 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 SLC25A51Q9H1U9 297 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 GLOD4Q9HC38 313 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 HAUS2Q9NVX0 235 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 TAAR2Q9P1P5 351 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 PLEKHM1Q9Y4G2 1056 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 PCDHA13Q9Y5I0 950 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 ADGRG1Q9Y653 693 aa7.78□□□□□ -1.16
CDH3-209ENST00000569080 OAS3Q9Y6K5 1087 aaKnown RBP7.78□□□□□ -1.16
CDH3-209ENST00000569080 BOD1L1Q8NFC6 3051 aa7.77□□□□□ -1.16
CDH3-209ENST00000569080 UNC13CQ8NB66 2214 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 CCDC187A0A096LP49 1063 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 A6NCN8 305 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 GOLGA6CA6NDK9 693 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 GOLGA6BA6NDN3 693 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 BTNL10A8MVZ5 291 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 INPP4BO15327 924 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 CST8O60676 142 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 NDUFA10O95299 355 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 EML2O95834 649 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 MT-CYBP00156 380 aaPredicted RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 PYGLP06737 847 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 PIRTP0C851 137 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 GOLGA6DP0CG33 693 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 TNNT1P13805 278 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 CTNNA1P35221 906 aaKnown RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 ACTN2P35609 894 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 NR2C2P49116 596 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 PCBP4P57723 403 aaKnown RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 B4GALNT1Q00973 533 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 CTBSQ01459 385 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 ZFP36L1Q07352 338 aaKnown RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 ILF3Q12906 894 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDH3-209ENST00000569080 PPP2R5EQ16537 467 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 PYCR3Q53H96 274 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 TEX44Q53QW1 395 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 TFDP3Q5H9I0 405 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 DOK6Q6PKX4 331 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 SLC30A9Q6PML9 568 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 KDELC1Q6UW63 502 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 BBS12Q6ZW61 710 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 NT5DC3Q86UY8 548 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 SLITRK4Q8IW52 837 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 LSMEM2Q8N112 164 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 NAGSQ8N159 534 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 LRRC57Q8N9N7 239 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 EXD1Q8NHP7 514 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 KIAA1524Q8TCG1 905 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 OXNAD1Q96HP4 312 aaPredicted RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 TEKT5Q96M29 485 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 SLC46A1Q96NT5 459 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 OR2M4Q96R27 311 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 GFM1Q96RP9 751 aaKnown RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 GORASP1Q9BQQ3 440 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 MLPHQ9BV36 600 aaPredicted RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 GSDMCQ9BYG8 508 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 LACRTQ9GZZ8 138 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 CDH19Q9H159 772 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 LRRN3Q9H3W5 708 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 DPEP2Q9H4A9 486 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 PRORYQ9H606 182 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 SUDS3Q9H7L9 328 aaPredicted RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 GOLGA6AQ9NYA3 693 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 VPS18Q9P253 973 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 MOSPD1Q9UJG1 213 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 ATXN7L1Q9ULK2 861 aaPredicted RBP7.77□□□□□ -1.17
CDH3-209ENST00000569080 TMEM98Q9Y2Y6 226 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 ZNF711Q9Y462 761 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 SPO11Q9Y5K1 396 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 DUSP10Q9Y6W6 482 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 ATRXP46100 2492 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 AHCTF1Q8WYP5 2266 aa7.77□□□□□ -1.17
CDH3-209ENST00000569080 LOC285095A0A1B0GVY8 99 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 RGSL1A5PLK6 1076 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 PRR19A6NJB7 356 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 AURKAO14965 403 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 PJA2O43164 708 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ECEL1O95672 775 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 NDST3O95803 873 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 ATP1A1P05023 1023 aaKnown RBP7.76□□□□□ -1.17
CDH3-209ENST00000569080 ITGA2BP08514 1039 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 NFKB1P19838 968 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 CSF2RBP32927 897 aa7.76□□□□□ -1.17
CDH3-209ENST00000569080 PTPN7P35236 360 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms