RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
COMMD4-224ENST00000568877 OR1A2Q9Y585 309 aa16.66■□□□□ 0.26
COMMD4-224ENST00000568877 ESYT3A0FGR9 886 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 MAGEB16A2A368 324 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 KHNYNO15037 678 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 LRP3O75074 770 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 HOXC4P09017 264 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 ZNF806P0C7X5 589 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 PLTPP55058 493 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 ARL4CP56559 192 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 CHRNA6Q15825 494 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 HIF1AQ16665 826 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 DNAJC21Q5F1R6 531 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 PDPK2PQ6A1A2 396 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 CASC4Q6P4E1 433 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 FAM151BQ6UXP7 276 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 ASCL5Q7RTU5 278 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 HEATR4Q86WZ0 1026 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 DCP2Q8IU60 420 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SLC22A18ASQ8N1D0 253 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 PEX13Q92968 403 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 CDKN2AIPNLQ96HQ2 116 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 ZNF778Q96MU6 729 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 NUSAP1Q9BXS6 441 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 TEX101Q9BY14 249 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SMOC1Q9H4F8 434 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 MRM3Q9HC36 420 aaKnown RBP16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SAMD15Q9P1V8 674 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SLC2A6Q9UGQ3 507 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SOX13Q9UN79 622 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 SPAG17Q6Q759 2223 aa16.65■□□□□ 0.26
COMMD4-224ENST00000568877 H7C0S8 307 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 CACNB4O00305 520 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 CCL22O00626 93 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 GAPDHSO14556 408 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 NMBRP28336 390 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 ARSDP51689 593 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 THOP1P52888 689 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 NXPH1P58417 271 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 XIAPP98170 497 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 CDK3Q00526 305 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 BNC1Q01954 994 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 ACVR1Q04771 509 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 SPEM2Q0P670 501 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 PDE1CQ14123 709 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 NFATC4Q14934 902 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 KIF19Q2TAC6 998 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 BBS9Q3SYG4 887 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 MSS51Q4VC12 460 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 ATP13A5Q4VNC0 1218 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 ZDHHC24Q6UX98 284 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 OR13J1Q8NGT2 312 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 HIC2Q96JB3 615 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 TBATAQ96M53 351 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 LGR4Q9BXB1 951 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 PHPT1Q9NRX4 125 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 FAM114A2Q9NRY5 505 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 TREX1Q9NSU2 369 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 SEMA4GQ9NTN9 838 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 CNOT6Q9ULM6 557 aaKnown RBP16.64■□□□□ 0.25
COMMD4-224ENST00000568877 DOCK9Q9BZ29 2069 aa16.64■□□□□ 0.25
COMMD4-224ENST00000568877 INPP4BO15327 924 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SLU7O95391 586 aaKnown RBP16.63■□□□□ 0.25
COMMD4-224ENST00000568877 PRAMEF1O95521 474 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SYPP08247 313 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 RHOXF2BP0C7M4 288 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 MYCLP1P12525 358 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-224ENST00000568877 MC4RP32245 332 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 CTSKP43235 329 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 KIAA1024LP59773 190 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 IRX4P78413 519 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 GRIK2Q13002 908 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 CBLBQ13191 982 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 PEX6Q13608 980 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 ITGA9Q13797 1035 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 CSRP2Q16527 193 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 TPRG1LQ5T0D9 272 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 TCEAL6Q6IPX3 200 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 CES3Q6UWW8 571 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
COMMD4-224ENST00000568877 DCLK2Q8N568 766 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 FBXO25Q8TCJ0 367 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 ZNF398Q8TD17 642 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 TCEAL3Q969E4 200 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 HDAC10Q969S8 669 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 MFSD3Q96ES6 412 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 COX14Q96I36 57 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 VPS35Q96QK1 796 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 RHOXF2Q9BQY4 288 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 ZDHHC5Q9C0B5 715 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 ASB8Q9H765 288 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SUDS3Q9H7L9 328 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms