RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 EEF1GP26641 437 aaKnown RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 POLR2LP62875 67 aaKnown RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 MAMLD1Q13495 774 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 DPYSQ14117 519 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 ERV3-1Q14264 604 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 TMCO4Q5TGY1 634 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 TXNRD3NBQ6F5E7 133 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 CHST15Q7LFX5 561 aaPredicted RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 ARHGAP22Q7Z5H3 698 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 SFRP1Q8N474 314 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 AP2M1Q96CW1 435 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 RIOK2Q9BVS4 552 aaKnown RBP14.75□□□□□ -0.05
USB1-214ENST00000568848 ASPSCR1Q9BZE9 553 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 LMBRD1Q9NUN5 540 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 TUBD1Q9UJT1 453 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 ITPR2Q14571 2701 aa14.75□□□□□ -0.05
USB1-214ENST00000568848 ZNF106Q9H2Y7 1883 aaKnown RBP14.74□□□□□ -0.05
USB1-214ENST00000568848 A1L4Q6 167 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 ANKRD62A6NC57 917 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 PGLSO95336 258 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 ACP5P13686 325 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 IL1R2P27930 398 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 ERCC5P28715 1186 aaPredicted RBP14.74□□□□□ -0.05
USB1-214ENST00000568848 SEPHS1P49903 392 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 HHEXQ03014 270 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 NSUN2Q08J23 767 aaKnown RBP eCLIP14.74□□□□□ -0.05
USB1-214ENST00000568848 ERMARDQ5T6L9 678 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 CDKAL1Q5VV42 579 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 SMYD5Q6GMV2 418 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 ACAD10Q6JQN1 1059 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 GALNT6Q8NCL4 622 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 OR10G6Q8NH81 332 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 APOBEC4Q8WW27 367 aaKnown RBP14.74□□□□□ -0.05
USB1-214ENST00000568848 PIH1D2Q8WWB5 315 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 KIAA1143Q96AT1 154 aaPredicted RBP14.74□□□□□ -0.05
USB1-214ENST00000568848 NUDCD1Q96RS6 583 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 FANCLQ9NW38 375 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 ZNHIT2Q9UHR6 403 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 CROTQ9UKG9 612 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 KCNMB2Q9Y691 235 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 CACNA1DQ01668 2161 aa14.74□□□□□ -0.05
USB1-214ENST00000568848 CREBBPQ92793 2442 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 KATNA1O75449 491 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 NTRK1P04629 796 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 CYP2A6P11509 494 aaPredicted RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 TYRP1P17643 537 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 COL8A1P27658 744 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 MAP4P27816 1152 aaKnown RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 DLSTP36957 453 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 STAT5AP42229 794 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 COPB1P53618 953 aaKnown RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 RAB15P59190 212 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 PTSQ03393 145 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 FOXM1Q08050 763 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 CHAF1BQ13112 559 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 SQSTM1Q13501 440 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 PLA2G4EQ3MJ16 856 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 CLEC17AQ6ZS10 378 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 GALNT13Q8IUC8 556 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 SCARF2Q96GP6 870 aaPredicted RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 CATSPER2Q96P56 530 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 MGME1Q9BQP7 344 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 TRIM55Q9BYV6 548 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 ZWILCHQ9H900 591 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 LRRC4CQ9HCJ2 640 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 NT5MQ9NPB1 228 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 PRDM8Q9NQV8 689 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 SIDT1Q9NXL6 827 aaKnown RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 DTLQ9NZJ0 730 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 OGFRQ9NZT2 677 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 SCHIP1Q9P0W5 487 aaPredicted RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 LUZP4Q9P127 313 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 PDP2Q9P2J9 529 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 CNOT6Q9ULM6 557 aaKnown RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 PHTF1Q9UMS5 762 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 TMEM184BQ9Y519 407 aaPredicted RBP14.73□□□□□ -0.05
USB1-214ENST00000568848 RPS6KL1Q9Y6S9 549 aa14.73□□□□□ -0.05
USB1-214ENST00000568848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 CDC14CA4D256 554 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 FADS2P1A8MWK0 482 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 MAFKO60675 156 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 DNAJC6O75061 913 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 FASLGP48023 281 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 LEPRP48357 1165 aaKnown RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 AIF1P55008 147 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 GPLD1P80108 840 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 KLRB1Q12918 225 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 RFTN1Q14699 578 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 PRR30Q53SZ7 412 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 E4F1Q66K89 784 aaPredicted RBP14.72□□□□□ -0.05
USB1-214ENST00000568848 CEACAM20Q6UY09 585 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 ADAMTSL4Q6UY14 1074 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 CPNE8Q86YQ8 564 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 NEK11Q8NG66 645 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 HSPH1Q92598 858 aa14.72□□□□□ -0.05
USB1-214ENST00000568848 ZNF653Q96CK0 615 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms