RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PYCR3Q53H96 274 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 GALNT13Q8IUC8 556 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 NRSN1Q8IZ57 195 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 CACNA2D3Q8IZS8 1091 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 CCDC112Q8NEF3 446 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 LRRN4Q8WUT4 740 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 RNF31Q96EP0 1072 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 SCARF2Q96GP6 870 aaPredicted RBP15.43■□□□□ 0.06
NME3-211ENST00000568561 CTRCQ99895 268 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 RIOK2Q9BVS4 552 aaKnown RBP15.43■□□□□ 0.06
NME3-211ENST00000568561 SLC25A18Q9H1K4 315 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 MRPL47Q9HD33 250 aaKnown RBP15.43■□□□□ 0.06
NME3-211ENST00000568561 GEMIN8Q9NWZ8 242 aaKnown RBP15.43■□□□□ 0.06
NME3-211ENST00000568561 AIPL1Q9NZN9 384 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 TTLL3Q9Y4R7 772 aa15.43■□□□□ 0.06
NME3-211ENST00000568561 ZNF106Q9H2Y7 1883 aaKnown RBP15.42■□□□□ 0.06
NME3-211ENST00000568561 FZD6O60353 706 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 RAD1O60671 282 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 ASMTLO95671 621 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 ATP1A1P05023 1023 aaKnown RBP15.42■□□□□ 0.06
NME3-211ENST00000568561 SFTPCP11686 197 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 SERPINB6P35237 376 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 GJC1P36383 396 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 PRKCIP41743 596 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 DSC2Q02487 901 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 SLC25A11Q02978 314 aaKnown RBP15.42■□□□□ 0.06
NME3-211ENST00000568561 PTSQ03393 145 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 TLE1Q04724 770 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 KRT81Q14533 505 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 ANO6Q4KMQ2 910 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 BOLA3Q53S33 107 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 BORAQ6PGQ7 559 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 CPNE8Q86YQ8 564 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 TRIM11Q96F44 468 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 SLC38A3Q99624 504 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 DDA1Q9BW61 102 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 CHKBQ9Y259 395 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 PPIL1Q9Y3C6 166 aa15.42■□□□□ 0.06
NME3-211ENST00000568561 OAS3Q9Y6K5 1087 aaKnown RBP15.42■□□□□ 0.06
NME3-211ENST00000568561 A0A0J9YYE9 177 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 DUX1O43812 170 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 TRBC1P01850 177 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 MYBL1P10243 752 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 MAPK9P45984 424 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 STC1P52823 247 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 EPHB1P54762 984 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 POLE2P56282 527 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 NFATC2Q13469 925 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 RALGPS1Q5JS13 557 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 TMEM71Q6P5X7 295 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 CHST15Q7LFX5 561 aaPredicted RBP15.41■□□□□ 0.06
NME3-211ENST00000568561 UNC5BQ8IZJ1 945 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 SFRP1Q8N474 314 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 BMPERQ8N8U9 685 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 LPCAT1Q8NF37 534 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 AHCYL2Q96HN2 611 aaKnown RBP15.41■□□□□ 0.06
NME3-211ENST00000568561 COX14Q96I36 57 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 POLR1EQ9GZS1 481 aaKnown RBP15.41■□□□□ 0.06
NME3-211ENST00000568561 THAP2Q9H0W7 228 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 ISCUQ9H1K1 167 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 KLHL3Q9UH77 587 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 KCNK6Q9Y257 313 aa15.41■□□□□ 0.06
NME3-211ENST00000568561 B4E171 279 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 CLDN7O95471 211 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 PRKAR1AP10644 381 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 ACP5P13686 325 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 IL4RP24394 825 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 TSPAN7P41732 249 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
NME3-211ENST00000568561 FASLGP48023 281 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 GPLD1P80108 840 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 KCNAB2Q13303 367 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 SQSTM1Q13501 440 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 PEX6Q13608 980 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 TDRD12Q587J7 1177 aaKnown RBP15.4■□□□□ 0.06
NME3-211ENST00000568561 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.4■□□□□ 0.06
NME3-211ENST00000568561 FAM182AQ5T1J6 154 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 CCDC183Q5T5S1 534 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 DCAF12Q5T6F0 453 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 ZNF765Q7L2R6 523 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 TEX26Q8N6G2 289 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 OR10G6Q8NH81 332 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 TEKT4Q8WW24 435 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 RTP4Q96DX8 246 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 NAP1L5Q96NT1 182 aaPredicted RBP15.4■□□□□ 0.06
NME3-211ENST00000568561 TDRD1Q9BXT4 1180 aaKnown RBP15.4■□□□□ 0.06
NME3-211ENST00000568561 ASPSCR1Q9BZE9 553 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 APMAPQ9HDC9 416 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 TBC1D29Q9UFV1 150 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 ZNHIT2Q9UHR6 403 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 ANAPC7Q9UJX3 599 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 PILRAQ9UKJ1 303 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 RELNP78509 3460 aa15.4■□□□□ 0.06
NME3-211ENST00000568561 NKX2-8O15522 239 aa15.39■□□□□ 0.05
NME3-211ENST00000568561 SNX2O60749 519 aa15.39■□□□□ 0.05
NME3-211ENST00000568561 DNAJC6O75061 913 aa15.39■□□□□ 0.05
NME3-211ENST00000568561 PRLP01236 227 aa15.39■□□□□ 0.05
NME3-211ENST00000568561 ZNF30P17039 623 aa15.39■□□□□ 0.05
NME3-211ENST00000568561 GARSP41250 739 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms