RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PCID2Q5JVF3 399 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 TSTD2Q5T7W7 516 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 ZDHHC20Q5W0Z9 365 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 ZDHHC24Q6UX98 284 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 ADAMTSL4Q6UY14 1074 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 HEATR4Q86WZ0 1026 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 DCLK2Q8N568 766 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 TRAM1L1Q8N609 369 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 FAM174AQ8TBP5 190 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 KLHDC7BQ96G42 594 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 SIGLEC10Q96LC7 697 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 WDR83Q9BRX9 315 aaKnown RBP17.9■□□□□ 0.46
COMMD4-222ENST00000568034 APOOQ9BUR5 198 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 KIFC1Q9BW19 673 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 LGR4Q9BXB1 951 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 TEX101Q9BY14 249 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 MRM3Q9HC36 420 aaKnown RBP17.9■□□□□ 0.46
COMMD4-222ENST00000568034 CHRAC1Q9NRG0 131 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 RAD18Q9NS91 495 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 TREX1Q9NSU2 369 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 NCDNQ9UBB6 729 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 ANAPC5Q9UJX4 755 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 TMPRSS11EQ9UL52 423 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 SLC6A14Q9UN76 642 aa17.9■□□□□ 0.46
COMMD4-222ENST00000568034 H7C0S8 307 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 TLR4O00206 839 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 TOR1BO14657 336 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 LRP3O75074 770 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 BANF1O75531 89 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 CFIP05156 583 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 ZNF806P0C7X5 589 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 CTSKP43235 329 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 GPR1P46091 355 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 YPEL5P62699 121 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 IRX4P78413 519 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 TMPRSS15P98073 1019 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 CDK3Q00526 305 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 GRIK2Q13002 908 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 TEAD4Q15561 434 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 CHRNA6Q15825 494 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 GLE1Q53GS7 698 aaKnown RBP17.89■□□□□ 0.45
COMMD4-222ENST00000568034 FAM151BQ6UXP7 276 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 BBOF1Q8ND07 529 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 PPHLN1Q8NEY8 458 aaKnown RBP17.89■□□□□ 0.45
COMMD4-222ENST00000568034 RUBCNQ92622 972 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 ART4Q93070 314 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 COX14Q96I36 57 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 TRIM56Q9BRZ2 755 aaKnown RBP17.89■□□□□ 0.45
COMMD4-222ENST00000568034 ZSCAN5AQ9BUG6 496 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 WDR26Q9H7D7 661 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 CAAP1Q9H8G2 361 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 SEMA4GQ9NTN9 838 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 PNMA8BQ9ULN7 279 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-222ENST00000568034 SOX13Q9UN79 622 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 ANKRD6Q9Y2G4 727 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 RALGAPA1Q6GYQ0 2036 aa17.89■□□□□ 0.45
COMMD4-222ENST00000568034 RIF1Q5UIP0 2472 aaKnown RBP17.89■□□□□ 0.45
COMMD4-222ENST00000568034 GLYATL1P3A0A0U1RQE8 302 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 HOXC4P09017 264 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 NMBRP28336 390 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 KIAA1024LP59773 190 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 GUCY2DQ02846 1103 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 DHX9Q08211 1270 aaKnown RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 CBLBQ13191 982 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 PDE1CQ14123 709 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 NFATC4Q14934 902 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 SF3A2Q15428 464 aaKnown RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 ATP13A5Q4VNC0 1218 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 ARMC3Q5W041 872 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 KCTD16Q68DU8 428 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 PDPK2PQ6A1A2 396 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 ALYREFQ86V81 257 aaKnown RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 PTCD2Q8WV60 388 aaKnown RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 PEX13Q92968 403 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 CDKN2AIPNLQ96HQ2 116 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 TBATAQ96M53 351 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 SPATA16Q9BXB7 569 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 FRMD8Q9BZ67 464 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 FNDC3AQ9Y2H6 1198 aaKnown RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 SNX11Q9Y5W9 270 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 ZFHX2Q9C0A1 2572 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-222ENST00000568034 PLXNB3Q9ULL4 1909 aa17.88■□□□□ 0.45
COMMD4-222ENST00000568034 TMEM131Q92545 1883 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 SPTY2D1-AS1A0A0U1RR47 76 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 SDR42E2A6NKP2 422 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 E7ESA3 106 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 NDC80O14777 642 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 KHNYNO15037 678 aaKnown RBP17.87■□□□□ 0.45
COMMD4-222ENST00000568034 PRAMEF1O95521 474 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 PYGLP06737 847 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 MYCLP1P12525 358 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-222ENST00000568034 ARNTP27540 789 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 HADHAP40939 763 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 LAMB3Q13751 1172 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 FZD2Q14332 565 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 CSRP2Q16527 193 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 CES3Q6UWW8 571 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 MACC1Q6ZN28 852 aa17.87■□□□□ 0.45
COMMD4-222ENST00000568034 NLRP9Q7RTR0 991 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms