RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK3-219ENST00000567805 PCDHGA8Q9Y5G5 932 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 ENTPD2Q9Y5L3 495 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 BSNQ9UPA5 3926 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 KALRNO60229 2985 aa4.77□□□□□ -1.65
CLK3-219ENST00000567805 CCDC187A0A096LP49 1063 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 A0A0U1RQS6 177 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 A0A1W2PQM1 296 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RGSL1A5PLK6 1076 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CDRT15L2A8MXV6 281 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 D6RAR5 112 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ZW10O43264 779 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 MTSS1O43312 755 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 NOBOXO60393 691 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CLDN7O95471 211 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 FUCA1P04066 466 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 FGF1P05230 155 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RPLP0P05388 317 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 TNNT1P13805 278 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RBMS1P29558 406 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 CCKBRP32239 447 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CYLC1P35663 651 aaPredicted RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 ADCY8P40145 1251 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CDKN2BP42772 138 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 NOP2P46087 812 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 GNPDA1P46926 289 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 POLD2P49005 469 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SPINT3P49223 89 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CCL7P80098 99 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SKOR1P84550 965 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ZBTB17Q13105 803 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 EIF3IQ13347 325 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 LRP8Q14114 963 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 NR1D2Q14995 579 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 PRKD1Q15139 912 aaPredicted RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 SPA17Q15506 151 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TAZQ16635 292 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 QPCTQ16769 361 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TEX44Q53QW1 395 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TFDP3Q5H9I0 405 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 HENMT1Q5T8I9 393 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 BROXQ5VW32 411 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 C11orf63Q6NUN7 778 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 MFSD7Q6UXD7 560 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 NPNTQ6UXI9 565 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 IGSF10Q6WRI0 2623 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RFLNAQ6ZTI6 216 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ZNF438Q7Z4V0 828 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SPRED1Q7Z699 444 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 NT5DC3Q86UY8 548 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 C17orf82Q86X59 251 aaPredicted RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 NRROSQ86YC3 692 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 KATNAL2Q8IYT4 538 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ARL14Q8N4G2 192 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CNTD1Q8N815 330 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 LPCAT1Q8NF37 534 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 EXD1Q8NHP7 514 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CCL4L1Q8NHW4 92 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CCHCR1Q8TD31 782 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ZDHHC1Q8WTX9 485 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 LRRN4Q8WUT4 740 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TFB1MQ8WVM0 346 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 SCAMP4Q969E2 229 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TADA1Q96BN2 335 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CCDC97Q96F63 343 aaPredicted RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 IMP4Q96G21 291 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 PRR11Q96HE9 360 aaPredicted RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 MRFAP1L1Q96HT8 127 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 COX14Q96I36 57 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CALR3Q96L12 384 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 TMEM74Q96NL1 305 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SLC46A1Q96NT5 459 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 AGAP3Q96P47 875 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SMIM14Q96QK8 99 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 PANX2Q96RD6 677 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SRPK1Q96SB4 655 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 DPH1Q9BZG8 443 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SLC25A51Q9H1U9 297 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 LRRN3Q9H3W5 708 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SYNDIG1Q9H7V2 258 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ASCL3Q9NQ33 180 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RAD18Q9NS91 495 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SPATS2LQ9NUQ6 558 aaKnown RBP4.76□□□□□ -1.65
CLK3-219ENST00000567805 PKD2L2Q9NZM6 624 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 SEPT10Q9P0V9 454 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 TAAR2Q9P1P5 351 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 VPS18Q9P253 973 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 LRIT1Q9P2V4 623 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 CD84Q9UIB8 345 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 HYOU1Q9Y4L1 999 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 PCDHA13Q9Y5I0 950 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 ALG6Q9Y672 507 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 RNF215Q9Y6U7 377 aa4.76□□□□□ -1.65
CLK3-219ENST00000567805 BOD1L1Q8NFC6 3051 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 hCG_1818297A0A087WSY0 165 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 A0A1W2PNU3 283 aaPredicted RBP4.75□□□□□ -1.65
CLK3-219ENST00000567805 RHPN2P1A8MT19 583 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 GPR89AB7ZAQ6 455 aa4.75□□□□□ -1.65
CLK3-219ENST00000567805 PLD2O14939 933 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms