RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SLC9B2Q86UD5 537 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 EHBP1Q8NDI1 1231 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 UBE2Q2Q8WVN8 375 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 ILKAPQ9H0C8 392 aaPredicted RBP13.67□□□□□ -0.22
SMG1-213ENST00000567737 UBE2TQ9NPD8 197 aaPredicted RBP13.67□□□□□ -0.22
SMG1-213ENST00000567737 LATS2Q9NRM7 1088 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 AGPAT4Q9NRZ5 378 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 GOLGA6AQ9NYA3 693 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 TMEM63CQ9P1W3 806 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 OSGIN2Q9Y236 505 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 B3GNT3Q9Y2A9 372 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 DNHD1Q96M86 4753 aa13.67□□□□□ -0.22
SMG1-213ENST00000567737 TMEM63AO94886 807 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
SMG1-213ENST00000567737 USP8P40818 1118 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 GFERP55789 205 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 POLR2LP62875 67 aaKnown RBP13.66□□□□□ -0.22
SMG1-213ENST00000567737 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
SMG1-213ENST00000567737 LRP8Q14114 963 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 CYTH1Q15438 398 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 MANEALQ5VSG8 457 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 PHLDB2Q86SQ0 1253 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 MMP21Q8N119 569 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 TBC1D31Q96DN5 1066 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
SMG1-213ENST00000567737 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
SMG1-213ENST00000567737 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
SMG1-213ENST00000567737 PCSK5Q92824 1860 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 ABCA2Q9BZC7 2435 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 TOX3O15405 576 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 C9P02748 559 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 FAM102AQ5T9C2 384 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 RAET1GQ6H3X3 334 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 COQ10AQ96MF6 247 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 TBC1D10AQ9BXI6 508 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 KLC2Q9H0B6 622 aa13.65□□□□□ -0.22
SMG1-213ENST00000567737 UBA2Q9UBT2 640 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 FARSAQ9Y285 508 aaKnown RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 KLF2Q9Y5W3 355 aaPredicted RBP13.65□□□□□ -0.22
SMG1-213ENST00000567737 SVILO95425 2214 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 RASSF9O75901 435 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 LRIG2O94898 1065 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 EML2O95834 649 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 SLC2A4P14672 509 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 COX6B1P14854 86 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 HOXB4P17483 251 aaPredicted RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 KRT9P35527 623 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 SCNN1AP37088 669 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 PRCPP42785 496 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 SYKP43405 635 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 GLRBP48167 497 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 HDAC4P56524 1084 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 PDE1BQ01064 536 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 ART3Q13508 389 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 PYCR3Q53H96 274 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 LYPLAL1Q5VWZ2 237 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 DENND2CQ68D51 928 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 MED25Q71SY5 747 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 LZTR1Q8N653 840 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 TMEM102Q8N9M5 508 aaPredicted RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 SCARF2Q96GP6 870 aaPredicted RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 CFAP57Q96MR6 1250 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 TGM7Q96PF1 710 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 BARD1Q99728 777 aaKnown RBP13.64□□□□□ -0.23
SMG1-213ENST00000567737 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 CFAP45Q9UL16 551 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 CCDC168Q8NDH2 2452 aa13.64□□□□□ -0.23
SMG1-213ENST00000567737 NAV3Q8IVL0 2385 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 A0A1B0GUH1 482 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 TIAF1O95411 115 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 CMA1P23946 247 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 TEAD1P28347 426 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 HNRNPH3P31942 346 aaKnown RBP13.63□□□□□ -0.23
SMG1-213ENST00000567737 FLT3P36888 993 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 RRADP55042 308 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 BCL2L1Q07817 233 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 RAPSNQ13702 412 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 IYDQ6PHW0 289 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
SMG1-213ENST00000567737 BNIPLQ7Z465 357 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 FJX1Q86VR8 437 aa13.63□□□□□ -0.23
SMG1-213ENST00000567737 NXPE1Q8N323 547 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms