RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	B4GALNT4	Q76KP1	1039 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	DAAM2	Q86T65	1068 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	NRROS	Q86YC3	692 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCNJL	Q8IV13	435 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	KATNAL2	Q8IYT4	538 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SNIP1	Q8TAD8	396 aa	Known RBP	6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZDHHC1	Q8WTX9	485 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	TFB1M	Q8WVM0	346 aa	Known RBP	6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	P3H4	Q92791	437 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	TADA1	Q96BN2	335 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNF578	Q96N58	590 aa	Predicted RBP	6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC46A1	Q96NT5	459 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	WDR24	Q96S15	920 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	AGAP2	Q99490	1192 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	MFRP	Q9BY79	579 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	CEP41	Q9BYV8	373 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	LRRN3	Q9H3W5	708 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SUDS3	Q9H7L9	328 aa	Predicted RBP	6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SYNDIG1	Q9H7V2	258 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	GLOD4	Q9HC38	313 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	MAGEE1	Q9HCI5	957 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	PKD2L2	Q9NZM6	624 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	TAAR2	Q9P1P5	351 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZNHIT2	Q9UHR6	403 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	CNOT6	Q9ULM6	557 aa	Known RBP	6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SUFU	Q9UMX1	484 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	TFR2	Q9UP52	801 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	SATB2	Q9UPW6	733 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	NBEA	Q8NFP9	2946 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	IGSF10	Q6WRI0	2623 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	ATRX	P46100	2492 aa		6.88	□□□□□ -1.31
SF3B3-209	ENST00000567635	FASN	P49327	2511 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SEC16A	O15027	2179 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	hCG_1818297	A0A087WSY0	165 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCDC187	A0A096LP49	1063 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635		A0A1W2PNU3	283 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635		A0A1W2PQM1	296 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SOWAHD	A6NJG2	315 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	RHPN2P1	A8MT19	583 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	HACD1	B0YJ81	288 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CASC3	O15234	703 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	INPP4B	O15327	924 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZW10	O43264	779 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	NUDT21	O43809	227 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PMPCB	O75439	489 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	IPO7	O95373	1038 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ASMTL	O95671	621 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ECEL1	O95672	775 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	NDST3	O95803	873 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	EPO	P01588	193 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	RPLP0	P05388	317 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PECAM1	P16284	738 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	FECH	P22830	423 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PTPN3	P26045	913 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	AK4	P27144	223 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ITPKB	P27987	946 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ABCG1	P45844	678 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	NAP1L1	P55209	391 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	COPS2	P61201	443 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CDK18	Q07002	472 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCDC173	Q0VFZ6	552 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	GALNT3	Q14435	633 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PRKD1	Q15139	912 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PCSK7	Q16549	785 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	C3orf38	Q5JPI3	329 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	FAM182A	Q5T1J6	154 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	HENMT1	Q5T8I9	393 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SLC30A9	Q6PML9	568 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	IGF2-AS	Q6U949	168 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	MARK2	Q7KZI7	788 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PID1	Q7Z2X4	250 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	LYSMD3	Q7Z3D4	306 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	TMC3	Q7Z5M5	1100 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PDZD3	Q86UT5	571 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	TRIM74	Q86UV6	250 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ZC3H18	Q86VM9	953 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	C17orf82	Q86X59	251 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CCDC50	Q8IVM0	306 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SFTPA2	Q8IWL1	248 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ARL14	Q8N4G2	192 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SPATA22	Q8NHS9	363 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	WDR36	Q8NI36	951 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PTCD2	Q8WV60	388 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	ANP32B	Q92688	251 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	LIN37	Q96GY3	246 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	PRR11	Q96HE9	360 aa	Predicted RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	COX14	Q96I36	57 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	RBM41	Q96IZ5	413 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	TEKT5	Q96M29	485 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	TMEM74	Q96NL1	305 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	OR2M4	Q96R27	311 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	TRIB3	Q96RU7	358 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	SRPK1	Q96SB4	655 aa	Known RBP	6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	HEMGN	Q9BXL5	484 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	GPR63	Q9BZJ6	419 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	STRADB	Q9C0K7	418 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	CDH19	Q9H159	772 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	GOLPH3	Q9H4A6	298 aa		6.87	□□□□□ -1.31
SF3B3-209	ENST00000567635	RMI1	Q9H9A7	625 aa		6.87	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms