RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GOLGA6DP0CG33 693 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 CEACAM1P13688 526 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 JUNDP17535 347 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 GRIA1P42261 906 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 GRK6P43250 576 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 GPR1P46091 355 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 FNTAP49354 379 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 ZNF140P52738 457 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 HK3P52790 923 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 SUZ12Q15022 739 aaKnown RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 TAF1AQ15573 450 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 PDPK2PQ6A1A2 396 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 RAET1GQ6H3X3 334 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 PHACTR4Q8IZ21 702 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 ZNF548Q8NEK5 533 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 DEFB124Q8NES8 71 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 BLOC1S5Q8TDH9 187 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 SLCO2A1Q92959 643 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 PDXPQ96GD0 296 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 LRRC61Q9BV99 259 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 CLPBQ9H078 707 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 IL26Q9NPH9 171 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 CASS4Q9NQ75 786 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 EIF2B3Q9NR50 452 aaKnown RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 PHPT1Q9NRX4 125 aaPredicted RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 DNAJC28Q9NX36 388 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 GOLGA6AQ9NYA3 693 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 ARL5AQ9Y689 179 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
RNF40-211ENST00000567365 CSNK1G3Q9Y6M4 447 aa12.34□□□□□ -0.43
RNF40-211ENST00000567365 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 AGAP14A8MT82 685 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 TRIM38O00635 465 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 SCAMP1O15126 338 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 PPFIA2O75334 1257 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 KELP23276 732 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 HTR1BP28222 390 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 CA5AP35218 305 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 SRP54P61011 504 aaKnown RBP12.33□□□□□ -0.44
RNF40-211ENST00000567365 XIAPP98170 497 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 PPARDQ03181 441 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 CCDC137Q6PK04 289 aaKnown RBP12.33□□□□□ -0.44
RNF40-211ENST00000567365 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 ZNF534Q76KX8 674 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 GLT6D1Q7Z4J2 308 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 LINC00523Q86TU6 105 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
RNF40-211ENST00000567365 TRAM1L1Q8N609 369 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 BTN2A2Q8WVV5 523 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 HIC2Q96JB3 615 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 VPS35Q96QK1 796 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 BPIFA1Q9NP55 256 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 MRPL40Q9NQ50 206 aaKnown RBP12.33□□□□□ -0.44
RNF40-211ENST00000567365 TOR4AQ9NXH8 423 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 PCYOX1Q9UHG3 505 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 KCTD3Q9Y597 815 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
RNF40-211ENST00000567365 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 CEP295Q9C0D2 2601 aa12.33□□□□□ -0.44
RNF40-211ENST00000567365 LY6G6EA0A0G2JKS1 128 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 PRSS38A1L453 326 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 MROH6A6NGR9 719 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 LMO7DNF2Z398 122 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 AQP9O43315 295 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 BUD23O43709 281 aaKnown RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 RASGRP1O95267 797 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 KRT14P02533 472 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 IVLP07476 585 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 CELA2BP08218 269 aaPredicted RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 TPSB2P20231 275 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 LPOP22079 712 aaPredicted RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 ACTN2P35609 894 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 PTGIRP43119 386 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 TNNT3P45378 269 aaPredicted RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 POLD2P49005 469 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 BLKP51451 505 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 KCNJ11Q14654 390 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 TPSAB1Q15661 275 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 ATP13A5Q4VNC0 1218 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 HID1Q8IV36 788 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 FAM181AQ8N9Y4 354 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 OR52K1Q8NGK4 314 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 OR4C6Q8NH72 309 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 RHBDD1Q8TEB9 315 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 GLYATL1Q969I3 302 aa12.32□□□□□ -0.44
RNF40-211ENST00000567365 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
RNF40-211ENST00000567365 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms