RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 EPB41L5Q9HCM4 733 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 MBNL1Q9NR56 388 aaKnown RBP11.43□□□□□ -0.58
KARS-207ENST00000566560 FAM114A2Q9NRY5 505 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 IL17CQ9P0M4 197 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
KARS-207ENST00000566560 GMEB2Q9UKD1 530 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 KCTD3Q9Y597 815 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 RALGAPA1Q6GYQ0 2036 aa11.43□□□□□ -0.58
KARS-207ENST00000566560 OTOGLQ3ZCN5 2332 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 GLYATL1P3A0A0U1RQE8 302 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 MROH6A6NGR9 719 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 SDR42E2A6NKP2 422 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 A6NNZ2 444 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 H0Y8X5 98 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 K7ESM1 405 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 CCL22O00626 93 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 BCAT2O15382 392 aaPredicted RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 PPFIA2O75334 1257 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 BANF1O75531 89 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PYGLP06737 847 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 GNSP15586 552 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 TSHRP16473 764 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 HOXD12P35452 270 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 MPLP40238 635 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 HADHAP40939 763 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 GPR1P46091 355 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 DRG2P55039 364 aaKnown RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 RACK1P63244 317 aaKnown RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 DPTQ07507 201 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 DHX9Q08211 1270 aaKnown RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 HLTFQ14527 1009 aaKnown RBP eCLIP11.42□□□□□ -0.58
KARS-207ENST00000566560 STAT4Q14765 748 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 TRADDQ15628 312 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 BBS9Q3SYG4 887 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 FNBP1LQ5T0N5 605 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 TSTD2Q5T7W7 516 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PEAR1Q5VY43 1037 aaPredicted RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 ARMC3Q5W041 872 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 ZDHHC24Q6UX98 284 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 KDM7AQ6ZMT4 941 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 NLRP9Q7RTR0 991 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 SYT12Q8IV01 421 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 GPR26Q8NDV2 337 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 FBXO25Q8TCJ0 367 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 STYXQ8WUJ0 223 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 ART4Q93070 314 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PWWP2AQ96N64 755 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 ZSCAN5AQ9BUG6 496 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 RIOK2Q9BVS4 552 aaKnown RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 ABCG8Q9H221 673 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 SEMA4AQ9H3S1 761 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 FAM83DQ9H4H8 585 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 WDR26Q9H7D7 661 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 MRM3Q9HC36 420 aaKnown RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 TM9SF3Q9HD45 589 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 NLE1Q9NVX2 485 aaPredicted RBP11.42□□□□□ -0.58
KARS-207ENST00000566560 FKBPLQ9UIM3 349 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PILRBQ9UKJ0 227 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 SOX13Q9UN79 622 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PCDHGA5Q9Y5G8 931 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 MAD1L1Q9Y6D9 718 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 PLXNB3Q9ULL4 1909 aa11.42□□□□□ -0.58
KARS-207ENST00000566560 LRP4O75096 1905 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 A0A1B0GTW7 788 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PRR5-ARHGAP8B1AHC4 643 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PRAMEF1O95521 474 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 SOD1P00441 154 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PGAM1P18669 254 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 CD38P28907 300 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 AFF3P51826 1226 aaKnown RBP11.41□□□□□ -0.58
KARS-207ENST00000566560 PDIA2Q13087 525 aaKnown RBP11.41□□□□□ -0.58
KARS-207ENST00000566560 CUL1Q13616 776 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 TEAD4Q15561 434 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 SKIDA1Q1XH10 827 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PNCKQ6P2M8 343 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 CENPUQ71F23 418 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 ABI3BPQ7Z7G0 1075 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 HEATR4Q86WZ0 1026 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 IFT20Q8IY31 132 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PELI3Q8N2H9 469 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 AGGF1Q8N302 714 aaeCLIP11.41□□□□□ -0.58
KARS-207ENST00000566560 TRAM1L1Q8N609 369 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 SUMF1Q8NBK3 374 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PLA2G15Q8NCC3 412 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 OR13J1Q8NGT2 312 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PEX13Q92968 403 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 ZNF669Q96BR6 464 aaPredicted RBP11.41□□□□□ -0.58
KARS-207ENST00000566560 STAMBPL1Q96FJ0 436 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 AGAP2Q99490 1192 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 C19orf43Q9BQ61 176 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 KIFC1Q9BW19 673 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 FAM129AQ9BZQ8 928 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 RRAGDQ9NQL2 400 aaPredicted RBP11.41□□□□□ -0.58
KARS-207ENST00000566560 CHRAC1Q9NRG0 131 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 TMEM74BQ9NUR3 256 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 MTRF1LQ9UGC7 380 aaKnown RBP11.41□□□□□ -0.58
KARS-207ENST00000566560 SLC2A6Q9UGQ3 507 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms