RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ETS1P14921 441 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 RPS2P15880 293 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 PFKFB1P16118 471 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ARF4P18085 180 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ADRA2CP18825 462 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KCNA5P22460 613 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KELP23276 732 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MYF6P23409 242 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 GPTP24298 496 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DUSP1P28562 367 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CTGFP29279 349 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CHRNA3P32297 505 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 SERPINB6P35237 376 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ACAA2P42765 397 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CYP2J2P51589 502 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ARSEP51690 589 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CLCN5P51795 746 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 HNRNPMP52272 730 aaKnown RBP eCLIP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CXADRP78310 365 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 RBPJQ06330 500 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CXCL9Q07325 125 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 GRM7Q14831 915 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC39A14Q15043 492 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 RPE65Q16518 533 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 SMN1Q16637 294 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CBWD6Q4V339 395 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 BOLA3Q53S33 107 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CBWD3Q5JTY5 395 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DAB2IPQ5VWQ8 1189 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 METRNLQ641Q3 311 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 HEPHL1Q6MZM0 1159 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC25A24Q6NUK1 477 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TEX38Q6PEX7 206 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 FBXO46Q6PJ61 603 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KIRREL2Q6UWL6 708 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 PLEKHM3Q6ZWE6 761 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM110Q86TL2 294 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TBC1D26Q86UD7 250 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC83Q8IWF9 413 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM217Q8N7C4 229 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM216AQ8WUB2 273 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ROBO4Q8WZ75 1007 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ATOH1Q92858 354 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 SPSB1Q96BD6 273 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 RRNAD1Q96FB5 475 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 NUDCD1Q96RS6 583 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TXN2Q99757 166 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM47Q9BQJ4 181 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CRACR2AQ9BSW2 395 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 INPP5KQ9BT40 448 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 PLA2G12BQ9BX93 195 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ADGRE3Q9BY15 652 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KRTAP3-1Q9BYR8 98 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 MMP27Q9H306 513 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 PLEKHA4Q9H4M7 779 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DENND2DQ9H6A0 471 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 NOL11Q9H8H0 719 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 ANKZF1Q9H8Y5 726 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 VPS37BQ9H9H4 285 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 C17orf75Q9HAS0 396 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 Q9N2J8 555 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 POLE3Q9NRF9 147 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 DNAJC17Q9NVM6 304 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 TRPM5Q9NZQ8 1165 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 CTNNA3Q9UI47 895 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 KCNE5Q9UJ90 142 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 EXO1Q9UQ84 846 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 LSM4Q9Y4Z0 139 aaKnown RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 HEMK1Q9Y5R4 338 aaPredicted RBP3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 NOX1Q9Y5S8 564 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 HS3ST3A1Q9Y663 406 aa3.35□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CTAGE9A4FU28 777 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CBY3A6NI87 242 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 AKR1B15C9JRZ8 316 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 H0YIN7 160 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CCDC188H7C350 402 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 PRYO14603 147 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 IKBKBO14920 756 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ATP2A1O14983 1001 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TTI1O43156 1089 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 TSC22D2O75157 780 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LETM1O95202 739 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SIX3O95343 332 aaPredicted RBP3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 MOCS3O95396 460 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 DIRAS3O95661 229 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SERPING1P05155 500 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ELANEP08246 267 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ADH4P08319 380 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ABHD2P08910 425 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 EBLN1P0CF75 366 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 ENGP17813 658 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 LBPP18428 481 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 CR2P20023 1033 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 AHCYP23526 432 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 FPR3P25089 353 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 KLRC2P26717 231 aa3.34□□□□□ -1.87
HERPUD1-211ENST00000566550 SFNP31947 248 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms