RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 FAM117BQ6P1L5 589 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 TMEM207Q6UWW9 146 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 LINC00299Q6ZSB3 139 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 AADATQ8N5Z0 425 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 PTGR2Q8N8N7 351 aaPredicted RBP21.52■■□□□ 1.04
SPSB3-208ENST00000566339 GIPC3Q8TF64 312 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 TMEM40Q8WWA1 233 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 TRUB1Q8WWH5 349 aaKnown RBP21.52■■□□□ 1.04
SPSB3-208ENST00000566339 MYLPFQ96A32 169 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 SLC39A3Q9BRY0 314 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 POLR1BQ9H9Y6 1135 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 SYTL2Q9HCH5 934 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 MID1IP1Q9NPA3 183 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 RGS18Q9NS28 235 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 TMEM30AQ9NV96 361 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 RNF186Q9NXI6 227 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 CDC14AQ9UNH5 594 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 CASP8AP2Q9UKL3 1982 aa21.52■■□□□ 1.04
SPSB3-208ENST00000566339 ATE1O95260 518 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 PEX11BO96011 259 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 HPRP00739 348 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CYP11A1P05108 521 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 VARSP26640 1264 aaKnown RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CDKN2DP55273 166 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 C21orf59P57076 290 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CTBSQ01459 385 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 LCP2Q13094 533 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CYP51A1Q16850 503 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 RBM48Q5RL73 367 aaKnown RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 MRNIPQ6NTE8 343 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 SFRP1Q8N474 314 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 TEX26Q8N6G2 289 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 OR13F1Q8NGS4 319 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 DNAJB3Q8WWF6 145 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CYGBQ8WWM9 190 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 FCRL2Q96LA5 508 aaPredicted RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 BRINP2Q9C0B6 783 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 GPN2Q9H9Y4 310 aaPredicted RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 AIG1Q9NVV5 245 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 POLR3BQ9NW08 1133 aaPredicted RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 ZIM2Q9NZV7 527 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 DSEQ9UL01 958 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 HAS3O00219 553 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 IFRD1O00458 451 aaPredicted RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 ODC1P11926 461 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 SLC44A4Q53GD3 710 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 SPRYD7Q5W111 196 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 KCTD8Q6ZWB6 473 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 METTL23Q86XA0 190 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 CHCHD4Q8N4Q1 142 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 ATOH8Q96SQ7 321 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 KCTD14Q9BQ13 255 aaPredicted RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 SIK2Q9H0K1 926 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 MAGEL2Q9UJ55 1249 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 ITGB1BP2Q9UKP3 347 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 OAS3Q9Y6K5 1087 aaKnown RBP21.51■■□□□ 1.03
SPSB3-208ENST00000566339 NUP205Q92621 2012 aa21.51■■□□□ 1.03
SPSB3-208ENST00000566339 ATP6AP2A0A1C7CYW4 349 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 STX16O14662 325 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 EI24O14681 340 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 KERAO60938 352 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 ATP6AP2O75787 350 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 THP07101 528 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 ENO2P09104 434 aaPredicted RBP21.5■■□□□ 1.03
SPSB3-208ENST00000566339 SLC2A3P11169 496 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 HGFP14210 728 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 NFYCQ13952 458 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 MFSD10Q14728 455 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 PITRM1Q5JRX3 1037 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 TXNDC11Q6PKC3 985 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 BPIFB1Q8TDL5 484 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 RAB2BQ8WUD1 216 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 POP5Q969H6 163 aaKnown RBP21.5■■□□□ 1.03
SPSB3-208ENST00000566339 PTERQ96BW5 349 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 TUBGCP3Q96CW5 907 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 PLEKHA8Q96JA3 519 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 POLG2Q9UHN1 485 aa21.5■■□□□ 1.03
SPSB3-208ENST00000566339 LOC285095A0A1B0GVY8 99 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 E9PAM4 449 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 SEC14L2O76054 403 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 PRSS23O95084 383 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 EPOP01588 193 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 MBL2P11226 248 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 ZNF37AP17032 561 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 HOXB6P17509 224 aaKnown RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 CCNA2P20248 432 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 KCNC1P48547 511 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 SLC5A3P53794 718 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 BROXQ5VW32 411 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 TWF2Q6IBS0 349 aaKnown RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 STAG3L4Q8TBR4 150 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 CHPT1Q8WUD6 406 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 KIAA1191Q96A73 305 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 PAIP1Q9H074 479 aaKnown RBP21.49■■□□□ 1.03
SPSB3-208ENST00000566339 EGFL7Q9UHF1 273 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 PATJQ8NI35 1801 aa21.49■■□□□ 1.03
SPSB3-208ENST00000566339 C16orf96A6NNT2 1141 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 SYCE1LA8MT33 242 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 PDHXO00330 501 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms