RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SLC9B1Q4ZJI4 515 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LETMD1Q6P1Q0 360 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L6PQ6QN14 398 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L2Q6R6M4 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 USP17L1Q7RTZ2 530 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KCTD20Q7Z5Y7 419 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TMEM151BQ8IW70 566 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GALNT12Q8IXK2 581 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CNTD1Q8N815 330 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PJA1Q8NG27 643 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HMGCLL1Q8TB92 370 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RPRD1AQ96P16 312 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 TMEM117Q9H0C3 514 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LEF1Q9UJU2 399 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 CDV3Q9UKY7 258 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 DHRS12A0PJE2 317 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TFECO14948 347 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 NDUFS2O75306 463 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IL33O95760 270 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NPR2P20594 1047 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MAP4P27816 1152 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 NDST1P52848 882 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 COPZ1P61923 177 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SCN1BQ07699 218 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DBPQ10586 325 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 NAE1Q13564 534 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 MFSD10Q14728 455 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARMC6Q6NXE6 501 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 C8orf82Q6P1X6 216 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 RTL10Q7L3V2 364 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 IFNEQ86WN2 208 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LYSMD2Q8IV50 215 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DDIASQ8IXT1 998 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ADGRG5Q8IZF4 528 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CHDHQ8NE62 594 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 OR2T3Q8NH03 318 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZFAND1Q8TCF1 268 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CRYGNQ8WXF5 182 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TMEM80Q96HE8 168 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZNF578Q96N58 590 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 MBOAT4Q96T53 435 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ACO2Q99798 780 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 BEX2Q9BXY8 128 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NXF2Q9GZY0 626 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 RAB9BQ9NP90 201 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 VAV3Q9UKW4 847 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 POFUT2Q9Y2G5 429 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CSNK1G3Q9Y6M4 447 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NRXN3Q9Y4C0 1643 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PNMA6FA0A0J9YX94 578 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 LINC00862A6NCI5 91 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 QSOX1O00391 747 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ANGPT2O15123 496 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 VNN1O95497 513 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OPN1MWP04001 364 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OPN1MW2P0DN77 364 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 OPN1MW3P0DN78 364 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZNF3P17036 446 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CKMT2P17540 419 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HCAR3P49019 387 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CSRP3P50461 194 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NUDT2P50583 147 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RAD23AP54725 363 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GP2P55259 537 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 DPYSL3Q14195 570 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PARP15Q460N3 678 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZCCHC12Q6PEW1 402 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZC3HC1Q86WB0 502 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 REXO1Q8N1G1 1221 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 TTLQ8NG68 377 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 SLC7A14Q8TBB6 771 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FIG4Q92562 907 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZSCAN5AQ9BUG6 496 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DPEP3Q9H4B8 488 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 JMJD4Q9H9V9 463 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RAVER2Q9HCJ3 691 aaKnown RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 SYBUQ9NX95 663 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 GTSE1Q9NYZ3 720 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TUBGCP6Q96RT7 1819 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DNAJB5O75953 348 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PCNAP12004 261 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 HOXB8P17481 243 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 GGT5P36269 586 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 POLD2P49005 469 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 KCNQ4P56696 695 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CD47Q08722 323 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 BAMBIQ13145 260 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 RPS6KA2Q15349 733 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 PTPN20Q4JDL3 420 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 Q5BKY6 102 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ARHGEF16Q5VV41 709 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 UGT3A1Q6NUS8 523 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.91□□□□□ -1.94
CHD9-218ENST00000566029 HID1Q8IV36 788 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 DEPDC4Q8N2C3 294 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 FAM110BQ8TC76 370 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 TAS1R2Q8TE23 839 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 NRBF2Q96F24 287 aa2.91□□□□□ -1.94
CHD9-218ENST00000566029 CEP170P1Q96L14 293 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms