RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 GDF6Q6KF10 455 aaPredicted RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 NOTUMQ6P988 496 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SCARA5Q6ZMJ2 495 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 LINC00696Q6ZRV3 163 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 HTR3DQ70Z44 454 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CPNE8Q86YQ8 564 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 KSR1Q8IVT5 923 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ADGRF2Q8IZF7 708 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CRYBG2Q8N1P7 616 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ZCCHC7Q8N3Z6 543 aaKnown RBP3.08□□□□□ -1.92
CHD9-216ENST00000565803 SPATA4Q8NEY3 305 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 EXOC6Q8TAG9 804 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 NSMCE1Q8WV22 266 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 MAIP1Q8WWC4 291 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CKAP2Q8WWK9 683 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 COPS5Q92905 334 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 C5orf30Q96GV9 206 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ANKRD27Q96NW4 1050 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 FCRL4Q96PJ5 515 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 KLHL5Q96PQ7 755 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 AGAP2Q99490 1192 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 HSD3B7Q9H2F3 369 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 RNPEPQ9H4A4 650 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 USP29Q9HBJ7 922 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 TMEM140Q9NV12 185 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 GFOD1Q9NXC2 390 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 SLC39A1Q9NY26 324 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 VPS18Q9P253 973 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 EXTL2Q9UBQ6 330 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 MID2Q9UJV3 735 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 ERVK-11Q9UQG0 969 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 CCL27Q9Y4X3 112 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 PCDHB1Q9Y5F3 818 aa3.08□□□□□ -1.92
CHD9-216ENST00000565803 DCDC2BA2VCK2 349 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PRR5-ARHGAP8B1AHC4 643 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 NPIPA7E9PJI5 369 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 H7C4K7 107 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ABCD4O14678 606 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TRIM3O75382 744 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 AKAP3O75969 853 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GSTP1P09211 210 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF888P0CJ79 500 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 NPIPA8P0DM63 369 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 FCGR1AP12314 374 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 FOSL2P15408 326 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PRKCAP17252 672 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CKMT2P17540 419 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TCN1P20061 433 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF10P21506 573 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 CD72P21854 359 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ITPKAP23677 461 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ADRA1DP25100 572 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RBL1P28749 1068 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 SPAM1P38567 509 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 MTNR1BP49286 362 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 COPB1P53618 953 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ATP5IP56385 69 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF445P59923 1031 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 STX1BP61266 288 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RNF4P78317 190 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 LGALS3BPQ08380 585 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GOLGA8FQ08AF8 430 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ABRQ12979 859 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 SNW1Q13573 536 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 RAB32Q13637 225 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PDK4Q16654 411 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RUNDC3AQ59EK9 446 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RARS2Q5T160 578 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 RIPPLY2Q5TAB7 128 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF658Q5TYW1 1059 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 SLC9A4Q6AI14 798 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 KIAA0930Q6ICG6 404 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 C17orf99Q6UX52 265 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TRAPPC11Q7Z392 1133 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 SPRED1Q7Z699 444 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TRIM69Q86WT6 500 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 WDR49Q8IV35 697 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GALNT4Q8N4A0 578 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TBC1D19Q8N5T2 526 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 OR8J1Q8NGP2 316 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PANK1Q8TE04 598 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF483Q8TF39 744 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 CAPSLQ8WWF8 208 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ING5Q8WYH8 240 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 KCNJ9Q92806 393 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GTF3C6Q969F1 213 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PERPQ96FX8 193 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RBM4BQ9BQ04 359 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZFYVE21Q9BQ24 234 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 RBM4Q9BWF3 364 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 PINK1Q9BXM7 581 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 NUF2Q9BZD4 464 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PRRG3Q9BZD7 231 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 MS4A7Q9GZW8 240 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 PRDM13Q9H4Q3 707 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 DNMT3LQ9UJW3 386 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 MYO6Q9UM54 1294 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GDAQ9Y2T3 454 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PCDHGB1Q9Y5G3 927 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 STON1Q9Y6Q2 735 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms