RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 PRCCQ92733 491 aaPredicted RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 AZIN2Q96A70 460 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 NTAN1Q96AB6 310 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 BTN2A3PQ96KV6 586 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 CSPG4P5Q96PW8 444 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 GABRG3Q99928 467 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SLC39A8Q9C0K1 460 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 SPHK2Q9NRA0 654 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 RAD18Q9NS91 495 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 FBXO10Q9UK96 956 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 AMFRQ9UKV5 643 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 STAP1Q9ULZ2 295 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.23□□□□□ -1.41
UBFD1-204ENST00000565634 OR51B4Q9Y5P0 310 aa6.23□□□□□ -1.41
UBFD1-204ENST00000565634 PCNX1Q96RV3 2341 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SCN8AQ9UQD0 1980 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 LRRD1A4D1F6 860 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 J3KR12 359 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 K7ERQ8 282 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 EEF2KO00418 725 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 TRIM38O00635 465 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SLC9A3R1O14745 358 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ZSCAN12O43309 604 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 IPO7O95373 1038 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 B3GALT4O96024 378 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 APOEP02649 317 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 KRT1P04264 644 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 C1SP09871 688 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 PECAM1P16284 738 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 JUNBP17275 347 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CKMT2P17540 419 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 WT1P19544 449 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 NME2P22392 152 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 PRKCHP24723 683 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CTNNA2P26232 953 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 HLA-FP30511 346 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 MAN1A1P33908 653 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CTNNA1P35221 906 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 EIF2DP41214 584 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SLC1A1P43005 524 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SLC11A2P49281 568 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CDKN1CP49918 316 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 COPAP53621 1224 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DYNLT1P63172 113 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 MRPS25P82663 173 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 GBE1Q04446 702 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SIX1Q15475 284 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DPYSL2Q16555 572 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 TBR1Q16650 682 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 HS1BP3Q53T59 392 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 RNF219Q5W0B1 726 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 RWDD4Q6NW29 188 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 OGFOD3Q6PK18 319 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CRTC1Q6UUV9 634 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 RFX8Q6ZV50 586 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ADIPOR2Q86V24 386 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 JAMLQ86YT9 394 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 PLD5Q8N7P1 536 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 OR6P1Q8NGX9 317 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DDI1Q8WTU0 396 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 THAP3Q8WTV1 239 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 VOPP1Q96AW1 172 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 HAUS1Q96CS2 278 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ATXN7L3BQ96GX2 97 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 RPRD1AQ96P16 312 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 RNF157Q96PX1 679 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 CDK5RAP1Q96SZ6 601 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ELF4Q99607 663 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 BBS2Q9BXC9 721 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DPH1Q9BZG8 443 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DCLK3Q9C098 648 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 POLR1BQ9H9Y6 1135 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ZNF71Q9NQZ8 489 aaPredicted RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 AASDHPPTQ9NRN7 309 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 SLCO3A1Q9UIG8 710 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 HIVEP3Q5T1R4 2406 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 DIDO1Q9BTC0 2240 aaKnown RBP6.22□□□□□ -1.41
UBFD1-204ENST00000565634 ZFHX3Q15911 3703 aa6.22□□□□□ -1.41
UBFD1-204ENST00000565634 hCG_1818297A0A087WSY0 165 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 F5H5T6 163 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 FFAR2O15552 330 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 MTSS1O43312 755 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 SMAD6O43541 496 aaKnown RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 ZMPSTE24O75844 475 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 ZRANB2O95218 330 aaKnown RBP eCLIP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 S100BP04271 92 aaPredicted RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 EPHX1P07099 455 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 SLC2A3P11169 496 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 VAV1P15498 845 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 EPHB2P29323 1055 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 OXTRP30559 389 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 CSKP41240 450 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 UQCRFS1P47985 274 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 LSSP48449 732 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 STK19P49842 368 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms