RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GOLGA6L9A6NEM1 432 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 KRT86O43790 486 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 IVLP07476 585 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 POLD2P49005 469 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 WNT3AP56704 352 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 CYP4F3Q08477 520 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 ILF3Q12906 894 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 DARS2Q6PI48 645 aaKnown RBP18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 TMC3Q7Z5M5 1100 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 CDKL3Q8IVW4 592 aaPredicted RBP18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 DCBLD1Q8N8Z6 715 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 KYQ8NBH2 561 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 CCDC112Q8NEF3 446 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 OR6C4Q8NGE1 309 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 CCL4L1Q8NHW4 92 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 GPBAR1Q8TDU6 330 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 DEPDC7Q96QD5 511 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 GSDMCQ9BYG8 508 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 C10orf88Q9H8K7 445 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 RAD18Q9NS91 495 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 TRNAU1APQ9NX07 287 aaKnown RBP18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 GUCA1BQ9UMX6 200 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 SLC17A4Q9Y2C5 497 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 TMEM98Q9Y2Y6 226 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 ZNF711Q9Y462 761 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 GPSM3Q9Y4H4 160 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 ADGRG1Q9Y653 693 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 ZFYVE26Q68DK2 2539 aa18.25■□□□□ 0.51
SYNGR3-204ENST00000564642 F5H423 210 aaPredicted RBP18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 ARHGAP6O43182 974 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 STK10O94804 968 aaKnown RBP18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 ASMTLO95671 621 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 SLC4A1P02730 911 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 FUCA1P04066 466 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 RBP3P10745 1247 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 MPP3Q13368 585 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 PEX6Q13608 980 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 PERM1Q5SV97 790 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 HENMT1Q5T8I9 393 aaKnown RBP18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 CDCP2Q5VXM1 449 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 ITPRIPL1Q6GPH6 555 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 OGFOD3Q6PK18 319 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 KDELC1Q6UW63 502 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 TRIM74Q86UV6 250 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 WDR24Q96S15 920 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 CCDC3Q9BQI4 270 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 NRSN2Q9GZP1 204 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 CDH19Q9H159 772 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 AK5Q9Y6K8 562 aa18.24■□□□□ 0.51
SYNGR3-204ENST00000564642 LOC285095A0A1B0GVY8 99 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 B4DGG1 531 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 DDX3YO15523 660 aaKnown RBP18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 EPOP01588 193 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 CAPNS1P04632 268 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 ADCY8P40145 1251 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 GEMP55040 296 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 ALS2CLQ60I27 953 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 MARK2Q7KZI7 788 aaKnown RBP18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 PROSER1Q86XN7 944 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 SLC25A41Q8N5S1 370 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 GPR156Q8NFN8 814 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 IPMKQ8NFU5 416 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 PTCD2Q8WV60 388 aaKnown RBP18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 EID2BQ96D98 161 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 NXPE2Q96DL1 559 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 COX14Q96I36 57 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 SPATA16Q9BXB7 569 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 FSD1LQ9BXM9 530 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 CAPN6Q9Y6Q1 641 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 KNTC1P50748 2209 aa18.23■□□□□ 0.51
SYNGR3-204ENST00000564642 ASXL3Q9C0F0 2248 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 FADS2P1A8MWK0 482 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 KCNN4O15554 427 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ZNF189O75820 626 aaPredicted RBP18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ANXA9O76027 345 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 PRPSAP1Q14558 356 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 SIRPB2Q5JXA9 342 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ANKRD20A2Q5SQ80 823 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ANKRD20A1Q5TYW2 823 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ANKRD20A3Q5VUR7 823 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 GALNT13Q8IUC8 556 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 GPR26Q8NDV2 337 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 CCDC74AQ96AQ1 378 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 SCARF2Q96GP6 870 aaPredicted RBP18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 OXNAD1Q96HP4 312 aaPredicted RBP18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 HES6Q96HZ4 224 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 MRGPRX2Q96LB1 330 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 OR2M4Q96R27 311 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ZSCAN5AQ9BUG6 496 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 GBA3Q9H227 469 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 TRABDQ9H4I3 376 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 SYNDIG1Q9H7V2 258 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 DKK4Q9UBT3 224 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 ZNHIT2Q9UHR6 403 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 RP1P56715 2156 aa18.22■□□□□ 0.51
SYNGR3-204ENST00000564642 FRYQ5TBA9 3013 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms