RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TRAM1L1Q8N609 369 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 C2CD4AQ8NCU7 369 aaPredicted RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 EID2BQ96D98 161 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 TCF12Q99081 682 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 DHRS4Q9BTZ2 278 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 SPATA16Q9BXB7 569 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 SLC6A17Q9H1V8 727 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 FAM83DQ9H4H8 585 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 INTS10Q9NVR2 710 aaKnown RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 SMOXQ9NWM0 555 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 LGALS13Q9UHV8 139 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 FBXO5Q9UKT4 447 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
CLK3-214ENST00000564096 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 A0A0C4DFX4 3053 aa12.77□□□□□ -0.37
CLK3-214ENST00000564096 MYLKQ15746 1914 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 PRUNE2Q8WUY3 3088 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 OR51F1A6NGY5 319 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 GOLGA8CPA6NN73 597 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 CXorf49A8MYA2 514 aaPredicted RBP12.76□□□□□ -0.37
CLK3-214ENST00000564096 MMP20O60882 483 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 NDUFS3O75489 264 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 C1QAP02745 245 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 KRT15P19012 456 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 TPMTP51580 245 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 CLCN5P51795 746 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 LIMK2P53671 638 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 FZD5Q13467 585 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 TYSND1Q2T9J0 566 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 SETMARQ53H47 684 aaPredicted RBP12.76□□□□□ -0.37
CLK3-214ENST00000564096 CWF19L1Q69YN2 538 aaKnown RBP12.76□□□□□ -0.37
CLK3-214ENST00000564096 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 GPR26Q8NDV2 337 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 DCAKDQ8WVC6 231 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 AP2M1Q96CW1 435 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 PGM2Q96G03 612 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 SPACA7Q96KW9 195 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 COQ10AQ96MF6 247 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 AGAP2Q99490 1192 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 RBBP8Q99708 897 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 ASB8Q9H765 288 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
CLK3-214ENST00000564096 IL26Q9NPH9 171 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 SMYD2Q9NRG4 433 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 SENP1Q9P0U3 644 aa12.76□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3EA0A087X179 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3KA0A087X1G2 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 A0A0U1RQS6 177 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3FA6NER0 549 aaPredicted RBP12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 F8W8V4 182 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 RECQL5O94762 991 aaPredicted RBP12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 AOC1P19801 751 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 ACRV1P26436 265 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 CXCL12P48061 93 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TAS2R38P59533 333 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 XIAPP98170 497 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 MPP1Q00013 466 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 CREB5Q02930 508 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 MTAPQ13126 283 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 SGCGQ13326 291 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 PEX6Q13608 980 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 GAS6Q14393 721 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 ITIH4Q14624 930 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 CHRNA6Q15825 494 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 MAP7D1Q3KQU3 841 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 HENMT1Q5T8I9 393 aaKnown RBP12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3GQ6DHY5 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3CQ6IPX1 549 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 Q6ZVL8 140 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TECPR1Q7Z6L1 1165 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 FAM124AQ86V42 546 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TRIM69Q86WT6 500 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 PHYKPLQ8IUZ5 450 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 DENND6AQ8IWF6 608 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBC1D3Q8IZP1 549 aaPredicted RBP12.75□□□□□ -0.37
CLK3-214ENST00000564096 RBFAQ8N0V3 343 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 HEXDCQ8WVB3 486 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 SH3GL2Q99962 352 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
CLK3-214ENST00000564096 SLC17A6Q9P2U8 582 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 CD84Q9UIB8 345 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 UNC80Q8N2C7 3258 aa12.75□□□□□ -0.37
CLK3-214ENST00000564096 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms