RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 HERC2P3Q9BVR0 1158 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 POLE4Q9NR33 117 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 RCOR3Q9P2K3 495 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 IKZF3Q9UKT9 509 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 WBP11Q9Y2W2 641 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CD3EAPO15446 510 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CYP2B6P20813 491 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 ELK4P28324 431 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PCSK6P29122 969 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 GRK3P35626 688 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CXCR3P49682 368 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PIGFQ07326 219 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 INO80DQ53TQ3 878 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 MUS81Q96NY9 551 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 OR52E6Q96RD3 313 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 SMOXQ9NWM0 555 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 LRATO95237 230 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 MLYCDO95822 493 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 POMCP01189 267 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 LGALS2P05162 132 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 ODC1P11926 461 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 NOVP48745 357 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 GSK3BP49841 420 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 ENPEPQ07075 957 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 SLC10A2Q12908 348 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 MED22Q15528 200 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 CYP2A13Q16696 494 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 SPDYE7PQ495Y7 208 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 C15orf39Q6ZRI6 1047 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 SLC22A16Q86VW1 577 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 TRPM4Q8TD43 1214 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 SMARCD1Q96GM5 515 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 FCRL3Q96P31 734 aaPredicted RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 DUSP16Q9BY84 665 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 NIFKQ9BYG3 293 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 C8orf4Q9NR00 106 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 EIF2B3Q9NR50 452 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 KRT84Q9NSB2 600 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PTBP2Q9UKA9 531 aaKnown RBP12.57□□□□□ -0.4
COMMD4-209ENST00000564068 PMF1-BGLAPU3KQ54 211 aa12.57□□□□□ -0.4
COMMD4-209ENST00000564068 GNG14A0A1W2PPG7 69 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 A8MT66 165 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 F8W810 466 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 VILLO15195 856 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 CPOXP36551 454 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 SYPL2Q5VXT5 272 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 BBS7Q8IWZ6 715 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 EXOC2Q96KP1 924 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 FCRL2Q96LA5 508 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 KLHL32Q96NJ5 620 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 BPIFA1Q9NP55 256 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 DKK3Q9UBP4 350 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 PRORSD1PA6NEY8 169 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 NFKBIEO00221 500 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 SOCS2O14508 198 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 RGS14O43566 566 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 HCRTO43612 131 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 RGS10O43665 173 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 IL1BP01584 269 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 UMPSP11172 480 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 IGFBP5P24593 272 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 FMO3P31513 532 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 SLC26A3P40879 764 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 CLCQ05315 142 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 CPSF6Q16630 551 aaKnown RBP eCLIP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 AP5B1Q2VPB7 878 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 TRIQKQ629K1 86 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 ZCCHC8Q6NZY4 707 aaKnown RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 MOB2Q70IA6 237 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 TMEM126BQ8IUX1 230 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 GPRC5AQ8NFJ5 357 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 GAD1Q99259 594 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 ITM2CQ9NQX7 267 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 CNTN3Q9P232 1028 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 ZNF221Q9UK13 617 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 H3BN98 237 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 ULK1O75385 1050 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 UGT2B4P06133 528 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 GGT5P36269 586 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 INHBCP55103 352 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 RAB14P61106 215 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 DAG1Q14118 895 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 GALNT3Q14435 633 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 MEP1AQ16819 746 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 INTS11Q5TA45 600 aaKnown RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 RBM4BQ9BQ04 359 aaKnown RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 RBM4Q9BWF3 364 aaKnown RBP12.56□□□□□ -0.4
COMMD4-209ENST00000564068 STMN3Q9NZ72 180 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 SLC2A6Q9UGQ3 507 aa12.56□□□□□ -0.4
COMMD4-209ENST00000564068 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms