RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NIPA2Q8N8Q9 360 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 AGBL5Q8NDL9 886 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 SLC37A2Q8TED4 501 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 NSMCE1Q8WV22 266 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 THAP2Q9H0W7 228 aa16.7■□□□□ 0.26
HDGFL3-203ENST00000563404 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 INPP4BO15327 924 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 ZW10O43264 779 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 MFSD11O43934 449 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 PRLP01236 227 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 SERPINB6P35237 376 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 FASLGP48023 281 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 ARSEP51690 589 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 STC1P52823 247 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 DSC2Q02487 901 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 PIGHQ14442 188 aaPredicted RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 ALG1LQ6GMV1 187 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 TMEM71Q6P5X7 295 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 ZNF765Q7L2R6 523 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 NLRP8Q86W28 1048 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 CPNE8Q86YQ8 564 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 FAM71BQ8TC56 605 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 LRRN4Q8WUT4 740 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 WDR24Q96S15 920 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 RIOK2Q9BVS4 552 aaKnown RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 DDA1Q9BW61 102 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 PDP2Q9P2J9 529 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 CNOT6Q9ULM6 557 aaKnown RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 CHKBQ9Y259 395 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 PRKAB1Q9Y478 270 aa16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 OAS3Q9Y6K5 1087 aaKnown RBP16.69■□□□□ 0.26
HDGFL3-203ENST00000563404 COL12A1Q99715 3063 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 EFCAB7A8K855 629 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 B4E171 279 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 DNAJC6O75061 913 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 MAP3K6O95382 1288 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 SFTPCP11686 197 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 CSTF2P33240 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 GARSP41250 739 aaKnown RBP16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 TSPAN7P41732 249 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 GPLD1P80108 840 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ITKQ08881 620 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 GALNT2Q10471 571 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 PEX6Q13608 980 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ATP13A4Q4VNC1 1196 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ANKS6Q68DC2 871 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 NCBP2-AS2Q69YL0 99 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ATG14Q6ZNE5 492 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 ARRDC2Q8TBH0 407 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 MAML1Q92585 1016 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 SPRY4Q9C004 299 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 POLR1EQ9GZS1 481 aaKnown RBP16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 SLC25A18Q9H1K4 315 aa16.68■□□□□ 0.26
HDGFL3-203ENST00000563404 SPENQ96T58 3664 aaKnown RBP16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 CLDN7O95471 211 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 ATP1A1P05023 1023 aaKnown RBP16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 ZNF30P17039 623 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 NIPAL4Q0D2K0 466 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 KRT81Q14533 505 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 NR1I3Q14994 352 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 FAM129CQ86XR2 697 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 GALNT13Q8IUC8 556 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 LRRC49Q8IUZ0 686 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 CACNA2D3Q8IZS8 1091 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 IL22RA1Q8N6P7 574 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 EXD1Q8NHP7 514 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 SLC38A3Q99624 504 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 DPYSL5Q9BPU6 564 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 NUP85Q9BW27 656 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 TDRD1Q9BXT4 1180 aaKnown RBP16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 RCOR3Q9P2K3 495 aaPredicted RBP16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 TBC1D29Q9UFV1 150 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 ANAPC7Q9UJX3 599 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 PILRAQ9UKJ1 303 aa16.67■□□□□ 0.26
HDGFL3-203ENST00000563404 ZFC3H1O60293 1989 aaKnown RBP16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 A8MU76 341 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 MATN3O15232 486 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 RAD1O60671 282 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 PPFIA2O75334 1257 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 ASMTLO95671 621 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 CYP1A2P05177 515 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 EPHB1P54762 984 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 LRP8Q14114 963 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 DPYSL3Q14195 570 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 PAFAH1B3Q15102 231 aaKnown RBP16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 SNAP47Q5SQN1 464 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 BORAQ6PGQ7 559 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 ARHGAP22Q7Z5H3 698 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 NRSN1Q8IZ57 195 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms