RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 MYO7BQ6PIF6 2116 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SPG11Q96JI7 2443 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 ABCA2Q9BZC7 2435 aa7.67□□□□□ -1.18
HERPUD1-206ENST00000563343 SPTBP11277 2137 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 A0A1B0GTL3 188 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 A8MX80 341 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 TRAFD1O14545 582 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 ZG16O60844 167 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 F13A1P00488 732 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 NEFLP07196 543 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 LPOP22079 712 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 PTPN4P29074 926 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 CASP14P31944 242 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 CDH5P33151 784 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 ADRA1BP35368 520 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 CSNK1DP48730 415 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 LRRC63Q05C16 580 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 CNGA3Q16281 694 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 ATL3Q6DD88 541 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 RWDD4Q6NW29 188 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 TRIM59Q8IWR1 403 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 RHOT1Q8IXI2 618 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 IQCKQ8N0W5 287 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 CISD2Q8N5K1 135 aaKnown RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 GLIS1Q8NBF1 620 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 SEC14L1Q92503 715 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 SHC3Q92529 594 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 NUS1Q96E22 293 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 TSG101Q99816 390 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 GPR87Q9BY21 358 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 PLCB1Q9NQ66 1216 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 NPDC1Q9NQX5 325 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 TBC1D29Q9UFV1 150 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 ITGB1BP2Q9UKP3 347 aa7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 NCOA6Q14686 2063 aaPredicted RBP7.66□□□□□ -1.18
HERPUD1-206ENST00000563343 SSU72P8A0A1W2PR75 194 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 RASA4BC9J798 803 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 PRSS44E7EML9 344 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 E2F3O00716 465 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 LRRTM2O43300 516 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 RASA4O43374 803 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 DIAPH2O60879 1101 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 MT-ND3P03897 115 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 CCNYL3P0C7X3 344 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ZSCAN22P10073 491 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 LHCGRP22888 699 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 HNRNPH3P31942 346 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 NOP2P46087 812 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 YBEYP58557 167 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 APBA1Q02410 837 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 PTK2Q05397 1052 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 CETN1Q12798 172 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 NFATC2Q13469 925 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ACOX1Q15067 660 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM102AQ5T9C2 384 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ZNF658Q5TYW1 1059 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM199XQ6PEV8 388 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 IYDQ6PHW0 289 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ZNF517Q6ZMY9 492 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ENOSF1Q7L5Y1 443 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ARCQ7LC44 396 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 GDF7Q7Z4P5 450 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 HSD11B1LQ7Z5J1 315 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 PHLDB2Q86SQ0 1253 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 SRLQ86TD4 932 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 PLXDC1Q8IUK5 500 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 RASGRP3Q8IV61 690 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 RTL3Q8N8U3 475 aaKnown RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ST6GALNAC3Q8NDV1 305 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 TBC1D31Q96DN5 1066 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 DTD2Q96FN9 168 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ELMO2Q96JJ3 720 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 CEP63Q96MT8 703 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 GOLPH3LQ9H4A5 285 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 EPB41L1Q9H4G0 881 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 UBA2Q9UBT2 640 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 B4GALT6Q9UBX8 382 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 LNPEPQ9UIQ6 1025 aa7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 AJAP1Q9UKB5 411 aaPredicted RBP7.65□□□□□ -1.18
HERPUD1-206ENST00000563343 ANKRD12Q6UB98 2062 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 LILRA5A6NI73 299 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 WASH4PA8MWX3 477 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 J3KR12 359 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TOX3O15405 576 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 DNAJC6O75061 913 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TMEM63AO94886 807 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 HEXIM1O94992 359 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 PLEKP08567 350 aaPredicted RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 TNFAIP3P21580 790 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 SERPINA4P29622 427 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 PTGER4P35408 488 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 CLCN1P35523 988 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 ETV3P41162 512 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 MAPK9P45984 424 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 SEPHS1P49903 392 aa7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
HERPUD1-206ENST00000563343 SNX16P57768 344 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms