RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 LRRN4Q8WUT4 740 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 FATE1Q969F0 183 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 COX14Q96I36 57 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 OR2M4Q96R27 311 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
CLK3-211ENST00000563297 CDH19Q9H159 772 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 AKAP7Q9P0M2 348 aaPredicted RBP15.66■□□□□ 0.1
CLK3-211ENST00000563297 AMACRQ9UHK6 382 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 LUC7L2Q9Y383 392 aaKnown RBP15.66■□□□□ 0.1
CLK3-211ENST00000563297 PCDHB11Q9Y5F2 797 aa15.66■□□□□ 0.1
CLK3-211ENST00000563297 TRBV23OR9-2A0A075B6M9 112 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 IGHV1OR21-1A0A087WYE8 117 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 HGSO14964 777 aaPredicted RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 CLDN7O95471 211 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 FGF3P11487 239 aaPredicted RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 CD82P27701 267 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 ARSDP51689 593 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 NIPAL4Q0D2K0 466 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 SLC10A2Q12908 348 aaPredicted RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 PDK2Q15119 407 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 TMEM164Q5U3C3 297 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 MARK2Q7KZI7 788 aaKnown RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 VASH2Q86V25 355 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 NRSN1Q8IZ57 195 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 EXD1Q8NHP7 514 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 ZNF564Q8TBZ8 553 aaPredicted RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 EXTL1Q92935 676 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 CCDC74BQ96LY2 380 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 WDR24Q96S15 920 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 TDRD1Q9BXT4 1180 aaKnown RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 CNOT6Q9ULM6 557 aaKnown RBP15.65■□□□□ 0.1
CLK3-211ENST00000563297 NENFQ9UMX5 172 aa15.65■□□□□ 0.1
CLK3-211ENST00000563297 INPP4BO15327 924 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 PROSCO94903 275 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 GYPCP04921 128 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 PYGLP06737 847 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 WT1P19544 449 aaPredicted RBP15.64■□□□□ 0.09
CLK3-211ENST00000563297 GJC1P36383 396 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 TAS2R40P59535 323 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 TPM4P67936 248 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 TRA2AQ13595 282 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLK3-211ENST00000563297 TENM4Q6N022 2769 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 XKR5Q6UX68 686 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 MAP7D3Q8IWC1 876 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 RAVER1Q8IY67 606 aaKnown RBP15.64■□□□□ 0.09
CLK3-211ENST00000563297 PQLC3Q8N755 202 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 OR4D9Q8NGE8 314 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 IQCDQ96DY2 449 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 TAAR9Q96RI9 348 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 ZNF670Q9BS34 389 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 KCNK4Q9NYG8 393 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 DNPEPQ9ULA0 475 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 TTLL3Q9Y4R7 772 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 PCDHGA4Q9Y5G9 962 aa15.64■□□□□ 0.09
CLK3-211ENST00000563297 PCYT1BQ9Y5K3 369 aaPredicted RBP15.64■□□□□ 0.09
CLK3-211ENST00000563297 SYCE3A1L190 88 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 DNAJC6O75061 913 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 ASMTLO95671 621 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 EML2O95834 649 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 ITGB2P05107 769 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 HLA-DQB2P05538 268 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 MPSTP25325 297 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 CSF2RBP32927 897 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 FASLGP48023 281 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 RPL26P61254 145 aaKnown RBP15.63■□□□□ 0.09
CLK3-211ENST00000563297 GBE1Q04446 702 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 GALNT13Q8IUC8 556 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 SFRP1Q8N474 314 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 FAF2Q96CS3 445 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 LYSMD1Q96S90 227 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 DPYSL5Q9BPU6 564 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 PCDH9Q9HC56 1237 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 ASH1LQ9NR48 2969 aaKnown RBP15.63■□□□□ 0.09
CLK3-211ENST00000563297 TMEM9Q9P0T7 183 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 CTTNBP2NLQ9P2B4 639 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 ZNHIT2Q9UHR6 403 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 RPL26L1Q9UNX3 145 aaKnown RBP15.63■□□□□ 0.09
CLK3-211ENST00000563297 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
CLK3-211ENST00000563297 ATP1A1P05023 1023 aaKnown RBP15.62■□□□□ 0.09
CLK3-211ENST00000563297 MMP2P08253 660 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 H2AFZP0C0S5 128 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 THRAP10827 490 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 MX2P20592 715 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 CASP14P31944 242 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 SPINT3P49223 89 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 GPLD1P80108 840 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 LRP8Q14114 963 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.62■□□□□ 0.09
CLK3-211ENST00000563297 TMEM71Q6P5X7 295 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 H2AFVQ71UI9 128 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 ZNF761Q86XN6 746 aaPredicted RBP15.62■□□□□ 0.09
CLK3-211ENST00000563297 ZSCAN1Q8NBB4 408 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 CCNYQ8ND76 341 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 AGBL5Q8NDL9 886 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 LPCAT1Q8NF37 534 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 SLC37A2Q8TED4 501 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 JPH3Q8WXH2 748 aaPredicted RBP15.62■□□□□ 0.09
CLK3-211ENST00000563297 RAPGEF5Q92565 580 aa15.62■□□□□ 0.09
CLK3-211ENST00000563297 NKD1Q969G9 470 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1402 ms