RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 EIF3IQ13347 325 aaKnown RBP16.75■□□□□ 0.27
CLK3-210ENST00000563112 GALNT3Q14435 633 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 SLC14A2Q15849 920 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 TAZQ16635 292 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 TEX44Q53QW1 395 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 TFDP3Q5H9I0 405 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 SLC30A9Q6PML9 568 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 KDELC2Q7Z4H8 507 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 GALNT13Q8IUC8 556 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 CCDC50Q8IVM0 306 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 KATNAL2Q8IYT4 538 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 TFB1MQ8WVM0 346 aaKnown RBP16.75■□□□□ 0.27
CLK3-210ENST00000563112 P3H4Q92791 437 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 SCARF2Q96GP6 870 aaPredicted RBP16.75■□□□□ 0.27
CLK3-210ENST00000563112 LIN37Q96GY3 246 aaPredicted RBP16.75■□□□□ 0.27
CLK3-210ENST00000563112 CALR3Q96L12 384 aaKnown RBP16.75■□□□□ 0.27
CLK3-210ENST00000563112 SLC46A1Q96NT5 459 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 PANX2Q96RD6 677 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 AGAP2Q99490 1192 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 ZFYVE1Q9HBF4 777 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 GLOD4Q9HC38 313 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 EPB41L5Q9HCM4 733 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 RAD18Q9NS91 495 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 RNF215Q9Y6U7 377 aa16.75■□□□□ 0.27
CLK3-210ENST00000563112 A0A1W2PQM1 296 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 RHPN2P1A8MT19 583 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 CASC3O15234 703 aaKnown RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 MTSS1O43312 755 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 ACTR1BP42025 376 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 ACTR1AP61163 376 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 PRKD1Q15139 912 aaPredicted RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 PCSK7Q16549 785 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 BROXQ5VW32 411 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 C11orf63Q6NUN7 778 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 MARK2Q7KZI7 788 aaKnown RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 SPRED1Q7Z699 444 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 DAAM2Q86T65 1068 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 TRIM74Q86UV6 250 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 PTCD2Q8WV60 388 aaKnown RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 COX14Q96I36 57 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 RBM41Q96IZ5 413 aaKnown RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 SRPK1Q96SB4 655 aaKnown RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 GOLPH3Q9H4A6 298 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 ASCL3Q9NQ33 180 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 ZNHIT2Q9UHR6 403 aa16.74■□□□□ 0.27
CLK3-210ENST00000563112 EPN1Q9Y6I3 576 aaPredicted RBP16.74■□□□□ 0.27
CLK3-210ENST00000563112 COL27A1Q8IZC6 1860 aaPredicted RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 KIF26BQ2KJY2 2108 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 PTPRQQ9UMZ3 2332 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 TNFSF15O95150 251 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 NDUFA10O95299 355 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 ECEL1O95672 775 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 PTPN3P26045 913 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 CCKBRP32239 447 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 TNNT3P45378 269 aaPredicted RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 PDX1P52945 283 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 NAP1L1P55209 391 aaKnown RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 MAZP56270 477 aaKnown RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 LRP8Q14114 963 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 LLGL1Q15334 1064 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 PYCR3Q53H96 274 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 B4GALNT4Q76KP1 1039 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 RAB11FIP2Q7L804 512 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 LYSMD3Q7Z3D4 306 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 C17orf82Q86X59 251 aaPredicted RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 SFTPA2Q8IWL1 248 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 SPACA3Q8IXA5 215 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 FBXO39Q8N4B4 442 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 KCNE4Q8WWG9 221 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 CCDC97Q96F63 343 aaPredicted RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 TEKT5Q96M29 485 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 TRIB3Q96RU7 358 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 GPR63Q9BZJ6 419 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 RBSNQ9H1K0 784 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 MAGEE1Q9HCI5 957 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 VPS18Q9P253 973 aa16.73■□□□□ 0.27
CLK3-210ENST00000563112 SAE1Q9UBE0 346 aaPredicted RBP16.73■□□□□ 0.27
CLK3-210ENST00000563112 CELSR3Q9NYQ7 3312 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 hCG_1818297A0A087WSY0 165 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 A0A1W2PNU3 283 aaPredicted RBP16.72■□□□□ 0.27
CLK3-210ENST00000563112 PLD2O14939 933 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 PMPCBO75439 489 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 NDST3O95803 873 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 PECAM1P16284 738 aaPredicted RBP16.72■□□□□ 0.27
CLK3-210ENST00000563112 HENMT1Q5T8I9 393 aaKnown RBP16.72■□□□□ 0.27
CLK3-210ENST00000563112 CCDC181Q5TID7 509 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 B3GNT8Q7Z7M8 397 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 ZC3H18Q86VM9 953 aaKnown RBP16.72■□□□□ 0.27
CLK3-210ENST00000563112 SPATA22Q8NHS9 363 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 WDR24Q96S15 920 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 VAT1Q99536 393 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 DPH1Q9BZG8 443 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 FOXP3Q9BZS1 431 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 RMI1Q9H9A7 625 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 FAM153AQ9UHL3 310 aa16.72■□□□□ 0.27
CLK3-210ENST00000563112 ATXN7L1Q9ULK2 861 aaPredicted RBP16.72■□□□□ 0.27
CLK3-210ENST00000563112 TFR2Q9UP52 801 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms