RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SPON2Q9BUD6 331 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 SMG9Q9H0W8 520 aaKnown RBP11.6□□□□□ -0.55
PCAT1-202ENST00000561978 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 PLA2G4CQ9UP65 541 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 USP34Q70CQ2 3546 aa11.6□□□□□ -0.55
PCAT1-202ENST00000561978 A0A0D9SEW6 157 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 C2orf78A6NCI8 922 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TRPC5OSA6NMA1 111 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CD3EAPO15446 510 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 STC2O76061 302 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 LATS1O95835 1130 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 RHOCP08134 193 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CCDC166P0CW27 439 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 THRAP10827 490 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 OGNP20774 298 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 GLDCP23378 1020 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CDC25CP30307 473 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CORO1AP31146 461 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 NUMBP49757 651 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 DLG1Q12959 904 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CSHL1Q14406 222 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 IHHQ14623 411 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CCDC6Q16204 474 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 KHDC1Q4VXA5 237 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 SLC9B1Q4ZJI4 515 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 GPR158Q5T848 1215 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 VWA5B1Q5TIE3 1220 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 BLOC1S5Q8TDH9 187 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 MYEOVQ96EZ4 313 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 GCNAQ96QF7 691 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CYP2S1Q96SQ9 504 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 SLX1AQ9BQ83 275 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 POPDC3Q9HBV1 291 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 IRAK4Q9NWZ3 460 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 UTP6Q9NYH9 597 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 NKX1-2Q9UD57 310 aaPredicted RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CDYLQ9Y232 598 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TBC1D30Q9Y2I9 924 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 MYLKQ15746 1914 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CHD5Q8TDI0 1954 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 F5P12259 2224 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TTC24A2A3L6 582 aaPredicted RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 INSIG1O15503 277 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 IPO13O94829 963 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CHRNGP07510 517 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 MPSTP25325 297 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 PFKPQ01813 784 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 GALNT1Q10472 559 aaPredicted RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TECRLQ5HYJ1 363 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 FAM78AQ5JUQ0 283 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 PARM1Q6UWI2 310 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 ULK2Q8IYT8 1036 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TTC16Q8NEE8 873 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 OR7D4Q8NG98 312 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 OR4L1Q8NH43 312 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 TBATAQ96M53 351 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 SLC22A12Q96S37 553 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 NDNQ99608 321 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 OLFM1Q99784 485 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 RPP25Q9BUL9 199 aaKnown RBP11.59□□□□□ -0.55
PCAT1-202ENST00000561978 SLC46A2Q9BY10 475 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 CATSPERZQ9NTU4 200 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 ZDHHC2Q9UIJ5 367 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 MCM8Q9UJA3 840 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 ARHGAP26Q9UNA1 814 aa11.59□□□□□ -0.55
PCAT1-202ENST00000561978 DMDP11532 3685 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 C2orf81A6NN90 581 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 MUSKO15146 869 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 PFDN6O15212 129 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 DCXO43602 365 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 PSMG1O95456 288 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 GOT2P00505 430 aaKnown RBP11.58□□□□□ -0.56
PCAT1-202ENST00000561978 PMLP29590 882 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 CPOXP36551 454 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 VIPR2P41587 438 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 ARSDP51689 593 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 RPS24P62847 133 aaKnown RBP11.58□□□□□ -0.56
PCAT1-202ENST00000561978 KLF10Q13118 480 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 NAA25Q14CX7 972 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 ACCSLQ4AC99 568 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 ACSBG2Q5FVE4 666 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 ZNF789Q5FWF6 425 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 TRIM74Q86UV6 250 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 TRIM73Q86UV7 250 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 CPSF7Q8N684 471 aaKnown RBP11.58□□□□□ -0.56
PCAT1-202ENST00000561978 GIMAP7Q8NHV1 300 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 MRPS31Q92665 395 aaKnown RBP11.58□□□□□ -0.56
PCAT1-202ENST00000561978 TRIB3Q96RU7 358 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 TCF12Q99081 682 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 RTKNQ9BST9 563 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 TRMOQ9BU70 441 aa11.58□□□□□ -0.56
PCAT1-202ENST00000561978 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
PCAT1-202ENST00000561978 KCNK12Q9HB15 430 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms