RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ARMCX6Q7L4S7 300 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SPATA21Q7Z572 469 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 YTHDF3Q7Z739 585 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 GPR149Q86SP6 731 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 TAX1BP1Q86VP1 789 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SPATS2Q86XZ4 545 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SLC41A1Q8IVJ1 513 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 LMNTD2Q8IXW0 634 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CACNA2D3Q8IZS8 1091 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CELF5Q8N6W0 485 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ANKS4BQ8N8V4 417 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC197Q8NCU1 140 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 LPCAT1Q8NF37 534 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 RAB3IL1Q8TBN0 382 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 BLOC1S5Q8TDH9 187 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 LRRC8CQ8TDW0 803 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 C10orf82Q8WW14 230 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SCG3Q8WXD2 468 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CCT6BQ92526 530 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PPP2R3CQ969Q6 453 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 GRAMD1AQ96CP6 724 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MRPL38Q96DV4 380 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ATXN7L3BQ96GX2 97 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MYO19Q96H55 970 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CABS1Q96KC9 395 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CDCA3Q99618 268 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 OLFM1Q99784 485 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 OMDQ99983 421 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PAIP2Q9BPZ3 127 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 C19orf43Q9BQ61 176 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MECRQ9BV79 373 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 APOL5Q9BWW9 433 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SLC2A11Q9BYW1 496 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 CEP44Q9C0F1 390 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 C20orf27Q9GZN8 174 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 NSUN3Q9H649 340 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MANSC1Q9H8J5 431 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SFXN1Q9H9B4 322 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 FBXO6Q9NRD1 293 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 IL17CQ9P0M4 197 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF69Q9UC07 566 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 EVLQ9UI08 416 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 SLC39A10Q9ULF5 831 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PHTF1Q9UMS5 762 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 RPL26L1Q9UNX3 145 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ANKRD6Q9Y2G4 727 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 MED16Q9Y2X0 877 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 PPIL1Q9Y3C6 166 aa6.53□□□□□ -1.36
CAPN3-210ENST00000561817 USP15Q9Y4E8 981 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF106Q9H2Y7 1883 aaKnown RBP6.53□□□□□ -1.36
CAPN3-210ENST00000561817 REV3LO60673 3130 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LAMA3Q16787 3333 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MUC22E2RYF6 1773 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 A0A0J9YYE9 177 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 A0A0U1RQS6 177 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 WASH3PC4AMC7 463 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 NEDD8-MDP1E9PL57 170 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 SLC9A3R1O14745 358 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CD3EAPO15446 510 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PHGDHO43175 533 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 DKK1O94907 266 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PIGNO95427 931 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TGDSO95455 350 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CRTAMO95727 393 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TRBC1P01850 177 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 COL6A2P12110 1019 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 OGNP20774 298 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LPOP22079 712 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CRABP2P29373 138 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 ALDH3A1P30838 453 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 GKP32189 559 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CA5AP35218 305 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 VIPR2P41587 438 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 GRIA4P48058 902 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 CDKN2DP55273 166 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 RAB10P61026 200 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 POU4F1Q01851 419 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MESP2Q0VG99 397 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 BST1Q10588 318 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 HYAL1Q12794 435 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PEX6Q13608 980 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 ZNF460Q14592 562 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 USP10Q14694 798 aaKnown RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 DHCR24Q15392 516 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 GEN1Q17RS7 908 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 MYLK3Q32MK0 819 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 GALNTL6Q49A17 601 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 SETMARQ53H47 684 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 LACTB2Q53H82 288 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-210ENST00000561817 C22orf39Q6P5X5 142 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 ELMSAN1Q6PJG2 1045 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM207Q6UWW9 146 aa6.52□□□□□ -1.37
CAPN3-210ENST00000561817 PTAR1Q7Z6K3 402 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms