RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 BPTFQ12830 3046 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 PRSS38A1L453 326 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 CACNB4O00305 520 aaPredicted RBP13.82□□□□□ -0.2
TPM1-230ENST00000561266 ZNF185O15231 689 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 YY2O15391 372 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 ZSCAN12O43309 604 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 HYAL3O43820 417 aaPredicted RBP13.82□□□□□ -0.2
TPM1-230ENST00000561266 ANXA9O76027 345 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 ACADVLP49748 655 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 PARP6Q2NL67 630 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 KHDC1Q4VXA5 237 aaKnown RBP13.82□□□□□ -0.2
TPM1-230ENST00000561266 CCDC157Q569K6 752 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 NRROSQ86YC3 692 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 BLOC1S5Q8TDH9 187 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 APOLD1Q96LR9 279 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 ETNK1Q9HBU6 452 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
TPM1-230ENST00000561266 NLGN3Q9NZ94 848 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 PKD2L2Q9NZM6 624 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 IL17CQ9P0M4 197 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 ZNF148Q9UQR1 794 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 ARL5AQ9Y689 179 aa13.82□□□□□ -0.2
TPM1-230ENST00000561266 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM1-230ENST00000561266 KNTC1P50748 2209 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 H3BM21 787 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 TNFRSF10CO14798 259 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 STK10O94804 968 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 RASGRP1O95267 797 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 FGF1P05230 155 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 TPH1P17752 444 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 HLA-DPA1P20036 260 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 HTR1BP28222 390 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 RPL22P35268 128 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 GRIA1P42261 906 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 CCNG2Q16589 344 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 LONRF2Q1L5Z9 754 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 ARHGEF18Q6ZSZ5 1173 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 RAB44Q7Z6P3 723 aaPredicted RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 RAVER1Q8IY67 606 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 PDCD7Q8N8D1 485 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 CCHCR1Q8TD31 782 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 BTN2A2Q8WVV5 523 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 SCARF2Q96GP6 870 aaPredicted RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 HIC2Q96JB3 615 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 TBL1YQ9BQ87 522 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 FSD1LQ9BXM9 530 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 SLC13A1Q9BZW2 595 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 KCTD5Q9NXV2 234 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 KLK13Q9UKR3 277 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 AAR2Q9Y312 384 aaKnown RBP13.81□□□□□ -0.2
TPM1-230ENST00000561266 PRKAB1Q9Y478 270 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 CSNK1G3Q9Y6M4 447 aa13.81□□□□□ -0.2
TPM1-230ENST00000561266 RGSL1A5PLK6 1076 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A9O60656 530 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 DNAJC6O75061 913 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 TNFP01375 233 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 IFNB1P01574 187 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 CKMT2P17540 419 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A6P19224 532 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A1P22309 533 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A4P22310 534 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 AK4P27144 223 aaPredicted RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A3P35503 534 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A5P35504 534 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 HMGCLP35914 325 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 GNPDA1P46926 289 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 DCDC1P59894 354 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 P3H1Q32P28 736 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 CCDC70Q6NSX1 233 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 DRICH1Q6PGQ1 229 aaPredicted RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 DHRS13Q6UX07 377 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 MARK2Q7KZI7 788 aaKnown RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 SLC35F3Q8IY50 421 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 TBATAQ96M53 351 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 OSBPL9Q96SU4 736 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 BOCQ9BWV1 1114 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 SPATA16Q9BXB7 569 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 AP1M1Q9BXS5 423 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 FRMD8P1Q9BZ68 369 aaPredicted RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 CARS2Q9HA77 564 aaKnown RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A7Q9HAW7 530 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A10Q9HAW8 530 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 UGT1A8Q9HAW9 530 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 ARNT2Q9HBZ2 717 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 IL26Q9NPH9 171 aa13.8□□□□□ -0.2
TPM1-230ENST00000561266 NFKBIL1Q9UBC1 381 aaPredicted RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 DRG1Q9Y295 367 aaKnown RBP13.8□□□□□ -0.2
TPM1-230ENST00000561266 CCL22O00626 93 aa13.79□□□□□ -0.2
TPM1-230ENST00000561266 MTX2O75431 263 aa13.79□□□□□ -0.2
TPM1-230ENST00000561266 AP2A1O95782 977 aa13.79□□□□□ -0.2
TPM1-230ENST00000561266 IVLP07476 585 aa13.79□□□□□ -0.2
TPM1-230ENST00000561266 CTSEP14091 401 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms