RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 RIOK2Q9BVS4 552 aaKnown RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 XPO4Q9C0E2 1151 aaKnown RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 PCDH9Q9HC56 1237 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PLEKHM1Q9Y4G2 1056 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PIEZO2Q9H5I5 2752 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PRAMEF33A0A0G2JMD5 474 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PPM1DO15297 605 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 PRAMEF10O60809 474 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 CLDN7O95471 211 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 HLA-DQB2P05538 268 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 TPM3P06753 285 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 KDELR1P24390 212 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 CD1CP29017 333 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 MAN1A1P33908 653 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 ETV5P41161 510 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 ACTR1BP42025 376 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 ACTR1AP61163 376 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 BIRC2Q13490 618 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 KIAA1614Q5VZ46 1190 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 ZNF574Q6ZN55 896 aaPredicted RBP16.13■□□□□ 0.17
SNX1-213ENST00000561026 ZNF605Q86T29 641 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 TRIM74Q86UV6 250 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 LPCAT1Q8NF37 534 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 OR8K1Q8NGG5 319 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 RAPGEF5Q92565 580 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 USP7Q93009 1102 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 HDAC11Q96DB2 347 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 COX14Q96I36 57 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 RNF157Q96PX1 679 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 LYSMD1Q96S90 227 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 NUDT22Q9BRQ3 303 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 WDR70Q9NW82 654 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 DTLQ9NZJ0 730 aa16.13■□□□□ 0.17
SNX1-213ENST00000561026 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 LIPCP11150 499 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 SQSTM1Q13501 440 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 LRP8Q14114 963 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 ZFYVE27Q5T4F4 411 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 MARK2Q7KZI7 788 aaKnown RBP16.12■□□□□ 0.17
SNX1-213ENST00000561026 CCDC13Q8IYE1 715 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 FOXJ2Q9P0K8 574 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 AKAP7Q9P0M2 348 aaPredicted RBP16.12■□□□□ 0.17
SNX1-213ENST00000561026 COL6A6A6NMZ7 2263 aa16.12■□□□□ 0.17
SNX1-213ENST00000561026 SCN8AQ9UQD0 1980 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 IGHV5-10-1A0A0J9YXX1 117 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 C9orf172C9J069 976 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 KCNK1O00180 336 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 HGSO14964 777 aaPredicted RBP16.11■□□□□ 0.17
SNX1-213ENST00000561026 INPP4BO15327 924 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 JCHAINP01591 159 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 MMP2P08253 660 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 MAPK10P53779 464 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 PPIDQ08752 370 aaKnown RBP16.11■□□□□ 0.17
SNX1-213ENST00000561026 LY6DQ14210 128 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 MESDQ14696 234 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 QPCTQ16769 361 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 GALNT13Q8IUC8 556 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 CNTD1Q8N815 330 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 SLC35G2Q8TBE7 412 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 WDR24Q96S15 920 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 SEMA4CQ9C0C4 833 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 B3GNT4Q9C0J1 378 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 DEF6Q9H4E7 631 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 SEPT10Q9P0V9 454 aa16.11■□□□□ 0.17
SNX1-213ENST00000561026 CNOT6Q9ULM6 557 aaKnown RBP16.11■□□□□ 0.17
SNX1-213ENST00000561026 IGHV1OR21-1A0A087WYE8 117 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 C1orf232A0A0U1RR37 186 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 LRRD1A4D1F6 860 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ZNF487B1APH4 448 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ANKRD66B4E2M5 251 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 AKR1B10O60218 316 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ASMTLO95671 621 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ATP1A1P05023 1023 aaKnown RBP16.1■□□□□ 0.17
SNX1-213ENST00000561026 CCL4P13236 92 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 PLA2G2AP14555 144 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 CD86P42081 329 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 SPINT3P49223 89 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 LIMK2P53671 638 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
SNX1-213ENST00000561026 TRIM14Q14142 442 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 NKAIN2Q5VXU1 208 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ZFAND4Q86XD8 727 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 DTX1Q86Y01 620 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 PLD5Q8N7P1 536 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 RCBTB1Q8NDN9 531 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 OR4D9Q8NGE8 314 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 CCDC74BQ96LY2 380 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
SNX1-213ENST00000561026 MLPHQ9BV36 600 aaPredicted RBP16.1■□□□□ 0.17
SNX1-213ENST00000561026 ADGRE3Q9BY15 652 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 FAM83DQ9H4H8 585 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ZNHIT6Q9NWK9 470 aaKnown RBP16.1■□□□□ 0.17
SNX1-213ENST00000561026 VPS18Q9P253 973 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 ZNHIT2Q9UHR6 403 aa16.1■□□□□ 0.17
SNX1-213ENST00000561026 RGSL1A5PLK6 1076 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms