RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 PRMT8Q9NR22 394 aaPredicted RBP5.48□□□□□ -1.53
ZEB1-220ENST00000560909 TREX1Q9NSU2 369 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 C2orf42Q9NWW7 574 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 MOCS1Q9NZB8 636 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 UBP1Q9NZI7 540 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 BFARQ9NZS9 450 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 IL17CQ9P0M4 197 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 USP36Q9P275 1121 aaKnown RBP5.48□□□□□ -1.53
ZEB1-220ENST00000560909 FZD4Q9ULV1 537 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 NFU1Q9UMS0 254 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 NDRG2Q9UN36 371 aaKnown RBP5.48□□□□□ -1.53
ZEB1-220ENST00000560909 SOX13Q9UN79 622 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
ZEB1-220ENST00000560909 CACNA1IQ9P0X4 2223 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ZCWPW2A0A1B0GU75 182 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 HEATR9A2RTY3 570 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TMEM221A6NGB7 291 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NPIPB15A6NHN6 443 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 AGAP14A8MT82 685 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 E7EVH7 732 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 H7C0S8 307 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 M0R296 226 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MID1O15344 667 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 PI15O43692 258 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 RNASEH1O60930 286 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 USP12O75317 370 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 USP1O94782 785 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TTC4O95801 387 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CPP00450 1065 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 PDGFBP01127 241 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ABHD2P08910 425 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 FAM153BP0C7A2 387 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ADRB3P13945 408 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ZNF30P17039 623 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 GM2AP17900 193 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 GABRG2P18507 467 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 LHCGRP22888 699 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ARNTP27540 789 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 HNF1BP35680 557 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MMP12P39900 470 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 P2RY2P41231 377 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 WASP42768 502 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MAGEA4P43358 317 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ARCN1P48444 511 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NEK3P51956 506 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ZNF140P52738 457 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 STC1P52823 247 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 METAP1P53582 386 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 GPX6P59796 221 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 DCDC1P59894 354 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CCDC15Q0P6D6 951 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CNTN1Q12860 1018 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 RALGDSQ12967 914 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MTAPQ13126 283 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 SLMAPQ14BN4 828 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 UBXN2BQ14CS0 331 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TAF1AQ15573 450 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ELF2Q15723 593 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 FAM153CQ494X1 144 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ANKRD20A4Q4UJ75 823 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CCDC38Q502W7 563 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 BEND6Q5SZJ8 279 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CERCAMQ5T4B2 595 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TSTD2Q5T7W7 516 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NEK5Q6P3R8 708 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CRTC1Q6UUV9 634 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CENPUQ71F23 418 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TRMT10CQ7L0Y3 403 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TECPR1Q7Z6L1 1165 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 KBTBD6Q86V97 674 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MMAAQ8IVH4 418 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NDUFAF2Q8N183 169 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MPP5Q8N3R9 675 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TAB3Q8N5C8 712 aaPredicted RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 AGBL5Q8NDL9 886 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 LPCAT1Q8NF37 534 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MDGA1Q8NFP4 955 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 OR13J1Q8NGT2 312 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 SCG3Q8WXD2 468 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 IFT81Q8WYA0 676 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NELL1Q92832 810 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 SIPA1Q96FS4 1042 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 IFT43Q96FT9 208 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 PPP1R16AQ96I34 528 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 COQ10AQ96MF6 247 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 SMIM14Q96QK8 99 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 APOL2Q9BQE5 337 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 FSD1LQ9BXM9 530 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 CDH19Q9H159 772 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ZDHHC6Q9H6R6 413 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 PCDH12Q9NPG4 1184 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 ZDHHC4Q9NPG8 344 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 B4GALT6Q9UBX8 382 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 MTRF1LQ9UGC7 380 aaKnown RBP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 TTLL3Q9Y4R7 772 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 FADS3Q9Y5Q0 445 aa5.47□□□□□ -1.53
ZEB1-220ENST00000560909 FAM169AQ9Y6X4 670 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms