RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 PCDH20Q8N6Y1 951 aaKnown RBP2.41□□□□□ -2.02
SPG11-222ENST00000560435 SLC38A5Q8WUX1 472 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 GMPPAQ96IJ6 420 aaPredicted RBP2.41□□□□□ -2.02
SPG11-222ENST00000560435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.41□□□□□ -2.02
SPG11-222ENST00000560435 NUF2Q9BZD4 464 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 CHODLQ9H9P2 273 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 MAGEE1Q9HCI5 957 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 KLK13Q9UKR3 277 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 GDAQ9Y2T3 454 aa2.41□□□□□ -2.02
SPG11-222ENST00000560435 PRR32B1ATL7 298 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 SLCO1B7G3V0H7 640 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 PI15O43692 258 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 PDE9AO76083 593 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 NR3C1P04150 777 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 FAM157CP0CG43 387 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 EDN2P20800 178 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 FASLGP48023 281 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 ARCN1P48444 511 aaKnown RBP2.4□□□□□ -2.03
SPG11-222ENST00000560435 RPP30P78346 268 aaKnown RBP2.4□□□□□ -2.03
SPG11-222ENST00000560435 PLIN5Q00G26 463 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 PPARDQ03181 441 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 TCTN1Q2MV58 587 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 SERTAD4-AS1Q5TG53 156 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 GGNBP1Q5YKI7 109 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 DOK6Q6PKX4 331 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 RAD9BQ6WBX8 426 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 SH2D5Q6ZV89 423 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 LRRTM1Q86UE6 522 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 OR5R1Q8NH85 324 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 SDCCAG3Q96C92 435 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 NDST4Q9H3R1 872 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 RAD21L1Q9H4I0 556 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 PELI2Q9HAT8 420 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 ZBTB20Q9HC78 741 aaPredicted RBP2.4□□□□□ -2.03
SPG11-222ENST00000560435 MARCH4Q9P2E8 410 aaPredicted RBP2.4□□□□□ -2.03
SPG11-222ENST00000560435 KCNJ14Q9UNX9 436 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.4□□□□□ -2.03
SPG11-222ENST00000560435 JRKLQ9Y4A0 524 aa2.4□□□□□ -2.03
SPG11-222ENST00000560435 FAM90A7PA6NKC0 464 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 SH2D7A6NKC9 451 aaPredicted RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 DUXAA6NLW8 204 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FAM90A22PA8MWA6 464 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FAM90A12PA8MX19 464 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FAM90A23PA8MXZ1 464 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 KLLNB2CW77 178 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 STX16-NPEPL1H3BU86 382 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 STX16O14662 325 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 NCAM2O15394 837 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 TPOP07202 933 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 IGHV4-38-2P0DP08 117 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 CEACAM8P31997 349 aaPredicted RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 FOXO1Q12778 655 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 PUM3Q15397 648 aaKnown RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 C2orf68Q2NKX9 166 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 CTXN3Q4LDR2 81 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 KRTCAP3Q53RY4 240 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FRG2Q64ET8 278 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 DUS1LQ6P1R4 473 aaKnown RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 BHLHB9Q6PI77 547 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 MFSD6Q6ZSS7 791 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 PLEKHM3Q6ZWE6 761 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 SLC46A3Q7Z3Q1 461 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 GPAT4Q86UL3 456 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 C11orf53Q8IXP5 236 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FAM177A1Q8N128 213 aaPredicted RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 ADSSL1Q8N142 457 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 SCML4Q8N228 414 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 ZBTB2Q8N680 514 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 THAP6Q8TBB0 222 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 MRGPRDQ8TDS7 321 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 FGFBP2Q9BYJ0 223 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 GPR108Q9NPR9 543 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 HINT3Q9NQE9 182 aaKnown RBP2.39□□□□□ -2.03
SPG11-222ENST00000560435 DERAQ9Y315 318 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 STK36Q9NRP7 1315 aa2.39□□□□□ -2.03
SPG11-222ENST00000560435 IGLV7-46A0A075B6I9 117 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 ANP32CO43423 234 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 CLPTM1O96005 669 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 CDC25CP30307 473 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 PTGER3P43115 390 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 TAS2R38P59533 333 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 CTU2Q2VPK5 515 aaKnown RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 FAM83BQ5T0W9 1011 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 ZNF280DQ6N043 979 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 FBXO46Q6PJ61 603 aaPredicted RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 Q6ZR54 194 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 PIWIL4Q7Z3Z4 852 aaKnown RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 HAPLN4Q86UW8 402 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 ADIPOR2Q86V24 386 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 ZCCHC9Q8N567 271 aaKnown RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 STN1Q9H668 368 aaKnown RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 BPIFA1Q9NP55 256 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 SNTG1Q9NSN8 517 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 DLGAP2Q9P1A6 1054 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 KIAA1456Q9P272 454 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 CTNNAL1Q9UBT7 734 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 SRP68Q9UHB9 627 aaKnown RBP2.38□□□□□ -2.03
SPG11-222ENST00000560435 PADI3Q9ULW8 664 aa2.38□□□□□ -2.03
SPG11-222ENST00000560435 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms