RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CRLF3Q8IUI8 442 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TXNDC5Q8NBS9 432 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 FAM45AQ8TCE6 357 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CCDC68Q9H2F9 335 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 NSUN3Q9H649 340 aaKnown RBP10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 OXSMQ9NWU1 459 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ELOVL2Q9NXB9 296 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 CLDND1Q9NY35 253 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 HEY2Q9UBP5 337 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 B4GALT6Q9UBX8 382 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 FBXO10Q9UK96 956 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TRIM33Q9UPN9 1127 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 ITM2BQ9Y287 266 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 WASF2Q9Y6W5 498 aa10.83□□□□□ -0.68
SNRPA1-211ENST00000560433 TCF20Q9UGU0 1960 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 A0A087X1B8 175 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TRIM13O60858 407 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 LTA4HP09960 611 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TCF3P15923 654 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ABCE1P61221 599 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 CHRNA6Q15825 494 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 FAM83EQ2M2I3 478 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 RALGPS1Q5JS13 557 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ETFBKMTQ8IXQ9 262 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TDHQ8IZJ6 230 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ISG20Q96AZ6 181 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ECHDC3Q96DC8 303 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 CHFRQ96EP1 664 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 SCRN2Q96FV2 425 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 UBXN10Q96LJ8 280 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 FAM161BQ96MY7 647 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 C7orf26Q96N11 449 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ACOX2Q99424 681 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 LMAN2LQ9H0V9 348 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 FBRSL1Q9HCM7 1045 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 HACD3Q9P035 362 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 DEC1Q9P2X7 70 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 PRDM4Q9UKN5 801 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 RIMKLBQ9ULI2 386 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 PLA2G4CQ9UP65 541 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 PRSS21Q9Y6M0 314 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TBC1D3BA6NDS4 549 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 NCF1BA6NI72 391 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 NCF1CA8MVU1 366 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 MTX2O75431 263 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 NFATC1O95644 943 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 NCF1P14598 390 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ZNF37AP17032 561 aaPredicted RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 WASP42768 502 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 MAPK8P45983 427 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 RAD51Q06609 339 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 TECRLQ5HYJ1 363 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ZYG11AQ6WRX3 759 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ISCA2Q86U28 154 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 METTL3Q86U44 580 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 SERPINA9Q86WD7 417 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 GIMAP7Q8NHV1 300 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 SCAMP4Q969E2 229 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 LRRC37BQ96QE4 947 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 HEPHQ9BQS7 1158 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 MRPL46Q9H2W6 279 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 POMKQ9H5K3 350 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 ARMCX1Q9P291 453 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 CDH7Q9ULB5 785 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 FIS1Q9Y3D6 152 aa10.82□□□□□ -0.68
SNRPA1-211ENST00000560433 GLYATL1P3A0A0U1RQE8 302 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 LRRC14BA6NHZ5 514 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 KPNA3O00505 521 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 HOXC11O43248 304 aaPredicted RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 HSPA4LO95757 839 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 ATP5BP06576 529 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 POU2F2P09086 479 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 CD1DP15813 335 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 MPSTP25325 297 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 NFATC2Q13469 925 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 GRIN2CQ14957 1233 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 DBN1Q16643 649 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 FNDC3BQ53EP0 1204 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 ATAT1Q5SQI0 421 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 AGAP9Q5VTM2 703 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 CHRDL2Q6WN34 429 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 TPRG1Q6ZUI0 275 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 USP45Q70EL2 814 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 MAVSQ7Z434 540 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 LMNTD2Q8IXW0 634 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 STK40Q8N2I9 435 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 PIWIL2Q8TC59 973 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 PPP4R1Q8TF05 950 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 PBXIP1Q96AQ6 731 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 TSPAN17Q96FV3 270 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 CPEB1Q9BZB8 566 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 CEP44Q9C0F1 390 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 ZNF576Q9H609 170 aa10.81□□□□□ -0.68
SNRPA1-211ENST00000560433 INTS10Q9NVR2 710 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms