RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 EBF2Q9HAK2 575 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 CCDC177Q9NQR7 707 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 BEX4Q9NWD9 120 aaPredicted RBP3.75□□□□□ -1.81
SPG11-218ENST00000559754 ZNF224Q9NZL3 707 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 VDAC3Q9Y277 283 aa3.75□□□□□ -1.81
SPG11-218ENST00000559754 ADGRF5Q8IZF2 1346 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 GOLGA6L10A0A0M3HER8 536 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 NPIPB15A6NHN6 443 aaPredicted RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 CBY3A6NI87 242 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 FAM90A7PA6NKC0 464 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 FAM90A22PA8MWA6 464 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 FAM90A12PA8MX19 464 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 FAM90A23PA8MXZ1 464 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 HNRNPCL2B2RXH8 293 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 ERVV-2B6SEH9 535 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 UBE2CO00762 179 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SH2B2O14492 632 aaPredicted RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 PER2O15055 1255 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 RGS11O94810 467 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 CSPG5O95196 566 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 QDPRP09417 244 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SLC2A4P14672 509 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 ANOS1P23352 680 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 ABCD1P33897 745 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 HADHAP40939 763 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 MMP14P50281 582 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 LRMPQ12912 555 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 PRPF4BQ13523 1007 aaKnown RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 DCTN2Q13561 401 aaKnown RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 NEDD9Q14511 834 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 NAA25Q14CX7 972 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SOWAHAQ2M3V2 549 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 KRTAP24-1Q3LI83 254 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 AMZ1Q400G9 498 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 ACCSLQ4AC99 568 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SETMARQ53H47 684 aaPredicted RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 ESCO2Q56NI9 601 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SLC22A25Q6T423 547 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 TMPRSS12Q86WS5 348 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 DCUN1D3Q8IWE4 304 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 MAB21L3Q8N8X9 362 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 AVL9Q8NBF6 648 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 KCNH5Q8NCM2 988 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 MSANTD4Q8NCY6 345 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 GJC3Q8NFK1 279 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 SPATA20Q8TB22 786 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 NEK9Q8TD19 979 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 JAKMIP2Q96AA8 810 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 ZC3HAV1LQ96H79 300 aaKnown RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 NCAPGQ9BPX3 1015 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.74□□□□□ -1.81
SPG11-218ENST00000559754 SLC25A18Q9H1K4 315 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 RABEP2Q9H5N1 569 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 HCN3Q9P1Z3 774 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 CHORDC1Q9UHD1 332 aaPredicted RBP3.74□□□□□ -1.81
SPG11-218ENST00000559754 SIX4Q9UIU6 781 aa3.74□□□□□ -1.81
SPG11-218ENST00000559754 TRIM64A6NGJ6 449 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 TRIM64BA6NI03 449 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 KLRF2D3W0D1 207 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 PI4K2BG5E9Z4 385 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 TNFSF14O43557 240 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 ZIC3O60481 467 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 LMX1BO60663 402 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 GJB3O75712 270 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 CLDN14O95500 239 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SRCP12931 536 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 ATP6V1B1P15313 513 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 CDH2P19022 906 aaPredicted RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 NFKBIAP25963 317 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 STX2P32856 288 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 EIF2DP41214 584 aaKnown RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 MSH2P43246 934 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 TNNT3P45378 269 aaPredicted RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 HARS2P49590 506 aaKnown RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 CXCR3P49682 368 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 CDH15P55291 814 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 RPL7AP62424 266 aaKnown RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 AIMP2Q13155 320 aaKnown RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 ITGADQ13349 1161 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 OASLQ15646 514 aaKnown RBP3.73□□□□□ -1.81
SPG11-218ENST00000559754 TMEM266Q2M3C6 531 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 ATP13A5Q4VNC0 1218 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 STPG1Q5TH74 334 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 PLBD1Q6P4A8 553 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 C17orf99Q6UX52 265 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 GDPD4Q6W3E5 623 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 MOB3CQ70IA8 216 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 IQCA1Q86XH1 822 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SFR1Q86XK3 245 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 PARP16Q8N5Y8 322 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 KCTD6Q8NC69 237 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 RSPH1Q8WYR4 309 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 TANKQ92844 425 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SNAPC3Q92966 411 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SAAL1Q96ER3 474 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 C3orf30Q96M34 536 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 UHRF2Q96PU4 802 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 CLSTN3Q9BQT9 956 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 MROH8Q9H579 483 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms