RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 TPM3P06753 285 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 H2AFZP0C0S5 128 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 CD1CP29017 333 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 HNRNPH3P31942 346 aaKnown RBP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 CASP14P31944 242 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 IHHQ14623 411 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 PYCR3Q53H96 274 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 ZFYVE27Q5T4F4 411 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 TMEM164Q5U3C3 297 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 H2AFVQ71UI9 128 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 ZFAND4Q86XD8 727 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 RAVER1Q8IY67 606 aaKnown RBP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 ARRDC2Q8TBH0 407 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 HDAC11Q96DB2 347 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 SGF29Q96ES7 293 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 COX14Q96I36 57 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 CCDC74BQ96LY2 380 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF830Q96NB3 372 aaPredicted RBP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 LYSMD1Q96S90 227 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 AGAP2Q99490 1192 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 RIOK2Q9BVS4 552 aaKnown RBP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 B3GNT4Q9C0J1 378 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 PCDH9Q9HC56 1237 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 PLEKHM1Q9Y4G2 1056 aa14.85□□□□□ -0.03
LRRC28-213ENST00000559399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRRC28-213ENST00000559399 GCN1Q92616 2671 aaKnown RBP14.84□□□□□ -0.03
LRRC28-213ENST00000559399 C1orf232A0A0U1RR37 186 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 PPM1DO15297 605 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 INPP4BO15327 924 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 CLDN7O95471 211 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 PRLP01236 227 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 CCL4P13236 92 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 MAN1A1P33908 653 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 NIPAL4Q0D2K0 466 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 SRSF6Q13247 344 aaKnown RBP14.84□□□□□ -0.03
LRRC28-213ENST00000559399 TRA2AQ13595 282 aaKnown RBP eCLIP14.84□□□□□ -0.03
LRRC28-213ENST00000559399 SLC18A3Q16572 532 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 MANEAQ5SRI9 462 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 NKAIN2Q5VXU1 208 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF574Q6ZN55 896 aaPredicted RBP14.84□□□□□ -0.03
LRRC28-213ENST00000559399 CCDC13Q8IYE1 715 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 PQLC3Q8N755 202 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 CCNYQ8ND76 341 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 RCBTB1Q8NDN9 531 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 OR4D9Q8NGE8 314 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 LRRN4Q8WUT4 740 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 DPYSL5Q9BPU6 564 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 PACSIN1Q9BY11 444 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 ZMYND15Q9H091 742 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 KCNK4Q9NYG8 393 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 DTLQ9NZJ0 730 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 VPS18Q9P253 973 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 LRP4O75096 1905 aa14.84□□□□□ -0.03
LRRC28-213ENST00000559399 ATMQ13315 3056 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 IGHV1OR21-1A0A087WYE8 117 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 ASMTLO95671 621 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 CSF2RBP32927 897 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 FASLGP48023 281 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 LIMK2P53671 638 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 GPLD1P80108 840 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 SQSTM1Q13501 440 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 VASH2Q86V25 355 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 DTX1Q86Y01 620 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 AGBL5Q8NDL9 886 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 CCDC112Q8NEF3 446 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 SLC37A2Q8TED4 501 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 XPO4Q9C0E2 1151 aaKnown RBP14.83□□□□□ -0.04
LRRC28-213ENST00000559399 DEF6Q9H4E7 631 aa14.83□□□□□ -0.04
LRRC28-213ENST00000559399 RGSL1A5PLK6 1076 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 B8ZZF3 427 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 STMND1H3BQB6 276 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 J3QKU1 62 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 KCNK1O00180 336 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 DNAJC6O75061 913 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 JCHAINP01591 159 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 ATP1A1P05023 1023 aaKnown RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 ITGB2P05107 769 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 TMEM253P0C7T8 217 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 THRAP10827 490 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 CD86P42081 329 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 SPINT3P49223 89 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 PPIDQ08752 370 aaKnown RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 SLC10A2Q12908 348 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 QPCTQ16769 361 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 SFRP1Q8N474 314 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 ZSCAN1Q8NBB4 408 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 OR10G6Q8NH81 332 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 CCHCR1Q8TD31 782 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 RAPGEF5Q92565 580 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 AHCYL2Q96HN2 611 aaKnown RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 RNF157Q96PX1 679 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 SLC38A3Q99624 504 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
LRRC28-213ENST00000559399 ADGRE3Q9BY15 652 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 FAM83DQ9H4H8 585 aa14.82□□□□□ -0.04
LRRC28-213ENST00000559399 PKD2L2Q9NZM6 624 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms